RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 SLC5A6Q9Y289 635 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 KIF26BQ2KJY2 2108 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 LOC100289279A0A1B0GTE1 492 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 DUXAA6NLW8 204 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 EEF1E1-BLOC1S5C9J1V9 151 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 H7C1C5 153 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 SLC17A2O00624 439 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 P2RX6O15547 441 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 MBTPS2O43462 519 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 MOSPD3O75425 235 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 NDUFB2O95178 105 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 SOD2P04179 222 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 LMO1P25800 156 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 LCN6P62502 163 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 SCGB2B2Q4G0G5 96 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 ALG10BQ5I7T1 473 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 PRSS41Q7RTY9 318 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 OR2L3Q8NG85 312 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 CMBLQ96DG6 245 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 LRFN5Q96NI6 719 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 ATG5Q9H1Y0 275 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 FITM1A5D6W6 292 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 TMEM235A6NFC5 223 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 PRR19A6NJB7 356 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 LMX1BO60663 402 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 SRPX2O60687 465 aaPredicted RBP10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 YIF1AO95070 293 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 ZNF888P0CJ79 500 aaPredicted RBP10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 IGFBP3P17936 291 aaPredicted RBP10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 NME2P22392 152 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 PSMB6P28072 239 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 SSBP1Q04837 148 aaKnown RBP10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 SRSF5Q13243 272 aaKnown RBP10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 IL15RAQ13261 267 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 ZNF234Q14588 700 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 SMCO1Q147U7 214 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 ELOCQ15369 112 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 ZNF124Q15973 351 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 SLC35D3Q5M8T2 416 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 LY6G5CQ5SRR4 150 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.5□□□□□ -0.735e-8■■■■□ 20
SMARCA1-201ENST00000371121 NRROSQ86YC3 692 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 IRF7Q92985 503 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 SMCO4Q9NRQ5 59 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 C19orf53Q9UNZ5 99 aaPredicted RBP10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 KCNK6Q9Y257 313 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 COLEC10Q9Y6Z7 277 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 CACNA1CQ13936 2221 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 TVP23AA6NH52 213 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 OR52A4PA6NMU1 304 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 AGPAT2O15120 278 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 IFNGP01579 166 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 ERCC1P07992 297 aaPredicted RBP10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 CD80P33681 288 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 PRKXP51817 358 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 AWAT1Q58HT5 328 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 ERN2Q76MJ5 926 aaKnown RBP10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 SLC16A9Q7RTY1 509 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 VWCEQ96DN2 955 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 OCSTAMPQ9BR26 566 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 ZNF780BQ9Y6R6 833 aa10.5□□□□□ -0.73
SMARCA1-201ENST00000371121 COL6A3P12111 3177 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 LRRC72A6NJI9 287 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 SOX1O00570 391 aaPredicted RBP10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 MFNGO00587 321 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 ARPC3O15145 178 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 LRP3O75074 770 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 SLC34A2O95436 690 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 F13BP05160 661 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 TPT1P13693 172 aaKnown RBP10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 RAB5AP20339 215 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 MPZP25189 248 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 THBS4P35443 961 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 SERPINF1P36955 418 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 EIF2S3P41091 472 aaKnown RBP10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 SUPT4H1P63272 117 aaKnown RBP10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 DPY19L2P2Q6ZN68 376 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 ZNF561Q8N587 486 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 CCDC107Q8WV48 283 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 DCUN1D4Q92564 292 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 HOXB13Q92826 284 aaPredicted RBP10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 SMARCD2Q92925 531 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 LRRC3BQ96PB8 259 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 MOGAT1Q96PD6 335 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 CHMP1AQ9HD42 196 aaPredicted RBP10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 RXFP3Q9NSD7 469 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 TREM2Q9NZC2 230 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 SLC22A13Q9Y226 551 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 MRPS2Q9Y399 296 aaKnown RBP10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 INSL6Q9Y581 213 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 C1orf196B1AJZ1 125 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 ADAP1O75689 374 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 PLGP00747 810 aaPredicted RBP10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 CISD3P0C7P0 127 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 NDUFB7P17568 137 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 ALOX5APP20292 161 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 OR2B8PP59922 312 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 MFGE8Q08431 387 aaPredicted RBP10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 LEG1Q6P5S2 330 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 RNF144BQ7Z419 303 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms