RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 SYT3Q9BQG1 590 aa17.61■□□□□ 0.41
SMNDC1-201ENST00000369592 BTBD10Q9BSF8 475 aa17.61■□□□□ 0.41
SMNDC1-201ENST00000369592 SYT4Q9H2B2 425 aa17.61■□□□□ 0.41
SMNDC1-201ENST00000369592 A0A1W2PPL8 197 aa17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 SOCS2O14508 198 aa17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 CD5LO43866 347 aa17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 APLNRP35414 380 aa17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 NR4A2P43354 598 aa17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 RPS6KA3P51812 740 aa17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 PCBD1P61457 104 aa17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 RGS7BPQ6MZT1 257 aaPredicted RBP17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 ZNF620Q6ZNG0 422 aa17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 ZNF101Q8IZC7 436 aa17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 SPATA3Q8NHX4 192 aa17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 BCAS4Q8TDM0 211 aa17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 GNPDA2Q8TDQ7 276 aa17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 POP5Q969H6 163 aaKnown RBP17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 FOXN4Q96NZ1 517 aa17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 BCL2L14Q9BZR8 327 aa17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 NUAK2Q9H093 628 aa17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 LRMDAQ9H2I8 198 aa17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 EMC7Q9NPA0 242 aa17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 VNN3Q9NY84 501 aa17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 REV1Q9UBZ9 1251 aa17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 TMCC3Q9ULS5 477 aa17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 FZR1Q9UM11 496 aa17.6■□□□□ 0.41
SMNDC1-201ENST00000369592 IGLV1-36A0A0B4J1U3 117 aa17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 C12orf71A8MTZ7 269 aa17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 M0R233 179 aa17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 DCTN6O00399 190 aa17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 KHDRBS3O75525 346 aaKnown RBP17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 UBOX5O94941 541 aa17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 STAMBPO95630 424 aa17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 PPP1R3DO95685 299 aa17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 CLPTM1O96005 669 aa17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 COX5BP10606 129 aa17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 SLC6A6P31641 620 aa17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 IFNGR2P38484 337 aa17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 RAD52P43351 418 aa17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 LSM6P62312 80 aaKnown RBP17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 TRAP1Q12931 704 aaKnown RBP17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 TMEM249Q2WGJ8 235 aa17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 TMEM255AQ5JRV8 349 aa17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 ZNF774Q6NX45 483 aa17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 CXXC5Q7LFL8 322 aaKnown RBP17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 ZNF786Q8N393 782 aa17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 FANK1Q8TC84 345 aa17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 SLC7A6OSQ96CW6 309 aaPredicted RBP17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 SAMD8Q96LT4 415 aa17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 DDOQ99489 341 aa17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 MS4A5Q9H3V2 200 aa17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 DYNLRB1Q9NP97 96 aa17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 COA3Q9Y2R0 106 aaPredicted RBP17.59■□□□□ 0.41
SMNDC1-201ENST00000369592 INAFM1C9JVW0 142 aa17.58■□□□□ 0.4
SMNDC1-201ENST00000369592 IDH3BO43837 385 aa17.58■□□□□ 0.4
SMNDC1-201ENST00000369592 SLC16A7O60669 478 aa17.58■□□□□ 0.4
SMNDC1-201ENST00000369592 GAAP10253 952 aa17.58■□□□□ 0.4
SMNDC1-201ENST00000369592 DAOP14920 347 aa17.58■□□□□ 0.4
SMNDC1-201ENST00000369592 GUCA1AP43080 201 aaPredicted RBP17.58■□□□□ 0.4
SMNDC1-201ENST00000369592 ALDH3B1P43353 468 aa17.58■□□□□ 0.4
SMNDC1-201ENST00000369592 RIN1Q13671 783 aa17.58■□□□□ 0.4
SMNDC1-201ENST00000369592 MAD2L1BPQ15013 274 aaPredicted RBP17.58■□□□□ 0.4
SMNDC1-201ENST00000369592 GLB1L2Q8IW92 636 aa17.58■□□□□ 0.4
SMNDC1-201ENST00000369592 LINC00471Q8N535 108 aa17.58■□□□□ 0.4
SMNDC1-201ENST00000369592 OR9Q2Q8NGE9 314 aa17.58■□□□□ 0.4
SMNDC1-201ENST00000369592 MARS2Q96GW9 593 aaKnown RBP17.58■□□□□ 0.4
SMNDC1-201ENST00000369592 ERMAPQ96PL5 475 aaPredicted RBP17.58■□□□□ 0.4
SMNDC1-201ENST00000369592 IL20Q9NYY1 176 aa17.58■□□□□ 0.4
SMNDC1-201ENST00000369592 C5orf49A4QMS7 147 aa17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 TNFRSF11BO00300 401 aa17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 TLX2O43763 284 aaPredicted RBP17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 MPZL1O95297 269 aa17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 IGHV3-13P01766 116 aa17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 USF1P22415 310 aaPredicted RBP17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 GDI2P50395 445 aaKnown RBP17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 HIST1H3AP68431 136 aa17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 ELFN2Q5R3F8 820 aa17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 ZNF362Q5T0B9 420 aaPredicted RBP17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 HIST2H3PS2Q5TEC6 136 aa17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 OR2T5Q6IEZ7 315 aa17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 HIST2H3AQ71DI3 136 aa17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 ALDH16A1Q8IZ83 802 aa17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 ADGRG5Q8IZF4 528 aa17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 OR2T29Q8NH02 315 aa17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 SYNPRQ8TBG9 265 aa17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 UBASH3BQ8TF42 649 aa17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 TSSK2Q96PF2 358 aa17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 PIMREGQ9BSJ6 248 aa17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 THTPAQ9BU02 230 aa17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 DUSP13Q9UII6 198 aa17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 B9D1Q9UPM9 204 aa17.57■□□□□ 0.4
SMNDC1-201ENST00000369592 IGHV4-61A0A0C4DH41 118 aa17.56■□□□□ 0.4
SMNDC1-201ENST00000369592 BHLHE40O14503 412 aa17.56■□□□□ 0.4
SMNDC1-201ENST00000369592 GASTP01350 101 aa17.56■□□□□ 0.4
SMNDC1-201ENST00000369592 HIST1H1CP16403 213 aaKnown RBP17.56■□□□□ 0.4
SMNDC1-201ENST00000369592 KLF3P57682 345 aaPredicted RBP17.56■□□□□ 0.4
SMNDC1-201ENST00000369592 AQP6Q13520 282 aa17.56■□□□□ 0.4
SMNDC1-201ENST00000369592 RFPL4BQ6ZWI9 263 aa17.56■□□□□ 0.4
SMNDC1-201ENST00000369592 VASH1Q7L8A9 365 aaPredicted RBP17.56■□□□□ 0.4
SMNDC1-201ENST00000369592 ZBTB46Q86UZ6 589 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms