RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 RPS6KA3P51812 740 aa16.24■□□□□ 0.19
CKS1B-203ENST00000368439 ZNF770Q6IQ21 691 aaPredicted RBP16.24■□□□□ 0.19
CKS1B-203ENST00000368439 ZNF774Q6NX45 483 aa16.24■□□□□ 0.19
CKS1B-203ENST00000368439 ADCK1Q86TW2 530 aa16.24■□□□□ 0.19
CKS1B-203ENST00000368439 ZNF101Q8IZC7 436 aa16.24■□□□□ 0.19
CKS1B-203ENST00000368439 CLPTM1LQ96KA5 538 aa16.24■□□□□ 0.19
CKS1B-203ENST00000368439 WACQ9BTA9 647 aa16.24■□□□□ 0.19
CKS1B-203ENST00000368439 BCL2L14Q9BZR8 327 aa16.24■□□□□ 0.19
CKS1B-203ENST00000368439 NUAK2Q9H093 628 aa16.24■□□□□ 0.19
CKS1B-203ENST00000368439 LRMDAQ9H2I8 198 aa16.24■□□□□ 0.19
CKS1B-203ENST00000368439 MAGIXQ9H6Y5 334 aa16.24■□□□□ 0.19
CKS1B-203ENST00000368439 DUSP13Q9UII6 198 aa16.24■□□□□ 0.19
CKS1B-203ENST00000368439 TMCC3Q9ULS5 477 aa16.24■□□□□ 0.19
CKS1B-203ENST00000368439 ABCA2Q9BZC7 2435 aa16.23■□□□□ 0.19
CKS1B-203ENST00000368439 C5orf49A4QMS7 147 aa16.23■□□□□ 0.19
CKS1B-203ENST00000368439 C12orf71A8MTZ7 269 aa16.23■□□□□ 0.19
CKS1B-203ENST00000368439 ACOT8O14734 319 aa16.23■□□□□ 0.19
CKS1B-203ENST00000368439 ARPC3O15145 178 aa16.23■□□□□ 0.19
CKS1B-203ENST00000368439 SLC16A7O60669 478 aa16.23■□□□□ 0.19
CKS1B-203ENST00000368439 USF1P22415 310 aaPredicted RBP16.23■□□□□ 0.19
CKS1B-203ENST00000368439 GIFP27352 417 aa16.23■□□□□ 0.19
CKS1B-203ENST00000368439 GUCA1AP43080 201 aaPredicted RBP16.23■□□□□ 0.19
CKS1B-203ENST00000368439 PCBD1P61457 104 aa16.23■□□□□ 0.19
CKS1B-203ENST00000368439 TSPAN31Q12999 210 aa16.23■□□□□ 0.19
CKS1B-203ENST00000368439 TMEM255AQ5JRV8 349 aa16.23■□□□□ 0.19
CKS1B-203ENST00000368439 TRPM8Q7Z2W7 1104 aa16.23■□□□□ 0.19
CKS1B-203ENST00000368439 ZNF786Q8N393 782 aa16.23■□□□□ 0.19
CKS1B-203ENST00000368439 BCAS4Q8TDM0 211 aa16.23■□□□□ 0.19
CKS1B-203ENST00000368439 GNPDA2Q8TDQ7 276 aa16.23■□□□□ 0.19
CKS1B-203ENST00000368439 ASB9Q96DX5 294 aa16.23■□□□□ 0.19
CKS1B-203ENST00000368439 ERMAPQ96PL5 475 aaPredicted RBP16.23■□□□□ 0.19
CKS1B-203ENST00000368439 BTBD10Q9BSF8 475 aa16.23■□□□□ 0.19
CKS1B-203ENST00000368439 PIMREGQ9BSJ6 248 aa16.23■□□□□ 0.19
CKS1B-203ENST00000368439 TRIM15Q9C019 465 aa16.23■□□□□ 0.19
CKS1B-203ENST00000368439 MS4A5Q9H3V2 200 aa16.23■□□□□ 0.19
CKS1B-203ENST00000368439 VNN3Q9NY84 501 aa16.23■□□□□ 0.19
CKS1B-203ENST00000368439 COA3Q9Y2R0 106 aaPredicted RBP16.23■□□□□ 0.19
CKS1B-203ENST00000368439 MALRD1Q5VYJ5 2156 aa16.22■□□□□ 0.19
CKS1B-203ENST00000368439 TNFRSF11BO00300 401 aa16.22■□□□□ 0.19
CKS1B-203ENST00000368439 DCTN6O00399 190 aa16.22■□□□□ 0.19
CKS1B-203ENST00000368439 TLX2O43763 284 aaPredicted RBP16.22■□□□□ 0.19
CKS1B-203ENST00000368439 KHDRBS3O75525 346 aaKnown RBP16.22■□□□□ 0.19
CKS1B-203ENST00000368439 MPZL1O95297 269 aa16.22■□□□□ 0.19
CKS1B-203ENST00000368439 LCKP06239 509 aa16.22■□□□□ 0.19
CKS1B-203ENST00000368439 ERCC1P07992 297 aaPredicted RBP16.22■□□□□ 0.19
CKS1B-203ENST00000368439 CCNOP22674 350 aa16.22■□□□□ 0.19
CKS1B-203ENST00000368439 SLC6A6P31641 620 aa16.22■□□□□ 0.19
CKS1B-203ENST00000368439 IFNGR2P38484 337 aa16.22■□□□□ 0.19
CKS1B-203ENST00000368439 GDI2P50395 445 aaKnown RBP16.22■□□□□ 0.19
CKS1B-203ENST00000368439 KCNMB1Q16558 191 aa16.22■□□□□ 0.19
CKS1B-203ENST00000368439 ELFN2Q5R3F8 820 aa16.22■□□□□ 0.19
CKS1B-203ENST00000368439 OTPQ5XKR4 325 aa16.22■□□□□ 0.19
CKS1B-203ENST00000368439 ZNF620Q6ZNG0 422 aa16.22■□□□□ 0.19
CKS1B-203ENST00000368439 OR9Q2Q8NGE9 314 aa16.22■□□□□ 0.19
CKS1B-203ENST00000368439 OR1J1Q8NGS3 322 aa16.22■□□□□ 0.19
CKS1B-203ENST00000368439 SYNPRQ8TBG9 265 aa16.22■□□□□ 0.19
CKS1B-203ENST00000368439 SAMD8Q96LT4 415 aa16.22■□□□□ 0.19
CKS1B-203ENST00000368439 TSSK2Q96PF2 358 aa16.22■□□□□ 0.19
CKS1B-203ENST00000368439 SNX18Q96RF0 628 aa16.22■□□□□ 0.19
CKS1B-203ENST00000368439 BPESC1Q9GZL8 116 aa16.22■□□□□ 0.19
CKS1B-203ENST00000368439 IGLV1-36A0A0B4J1U3 117 aa16.21■□□□□ 0.19
CKS1B-203ENST00000368439 IGHV4-61A0A0C4DH41 118 aa16.21■□□□□ 0.19
CKS1B-203ENST00000368439 A0A1W2PPW3 197 aa16.21■□□□□ 0.19
CKS1B-203ENST00000368439 LYNX1G3V0Z9 82 aa16.21■□□□□ 0.19
CKS1B-203ENST00000368439 UBOX5O94941 541 aa16.21■□□□□ 0.19
CKS1B-203ENST00000368439 HPXP02790 462 aa16.21■□□□□ 0.19
CKS1B-203ENST00000368439 TP53P04637 393 aaPredicted RBP16.21■□□□□ 0.19
CKS1B-203ENST00000368439 LYNX1P0DP58 116 aa16.21■□□□□ 0.19
CKS1B-203ENST00000368439 COX5BP10606 129 aa16.21■□□□□ 0.19
CKS1B-203ENST00000368439 NAT2P11245 290 aa16.21■□□□□ 0.19
CKS1B-203ENST00000368439 HIST1H1CP16403 213 aaKnown RBP16.21■□□□□ 0.19
CKS1B-203ENST00000368439 KLF3P57682 345 aaPredicted RBP16.21■□□□□ 0.19
CKS1B-203ENST00000368439 LSM6P62312 80 aaKnown RBP16.21■□□□□ 0.19
CKS1B-203ENST00000368439 DBPQ10586 325 aaPredicted RBP16.21■□□□□ 0.19
CKS1B-203ENST00000368439 PPP1R8Q12972 351 aaKnown RBP16.21■□□□□ 0.19
CKS1B-203ENST00000368439 RIN1Q13671 783 aa16.21■□□□□ 0.19
CKS1B-203ENST00000368439 CARTPTQ16568 116 aa16.21■□□□□ 0.19
CKS1B-203ENST00000368439 RFPL4BQ6ZWI9 263 aa16.21■□□□□ 0.19
CKS1B-203ENST00000368439 GLB1L2Q8IW92 636 aa16.21■□□□□ 0.19
CKS1B-203ENST00000368439 ALDH16A1Q8IZ83 802 aa16.21■□□□□ 0.19
CKS1B-203ENST00000368439 UBASH3BQ8TF42 649 aa16.21■□□□□ 0.19
CKS1B-203ENST00000368439 C11orf40Q8WZ69 217 aa16.21■□□□□ 0.19
CKS1B-203ENST00000368439 MARS2Q96GW9 593 aaKnown RBP16.21■□□□□ 0.19
CKS1B-203ENST00000368439 TAAR3PQ9P1P4 343 aa16.21■□□□□ 0.19
CKS1B-203ENST00000368439 NCR1O76036 304 aa16.2■□□□□ 0.18
CKS1B-203ENST00000368439 GPANK1O95872 356 aa16.2■□□□□ 0.18
CKS1B-203ENST00000368439 NGFP01138 241 aa16.2■□□□□ 0.18
CKS1B-203ENST00000368439 GASTP01350 101 aa16.2■□□□□ 0.18
CKS1B-203ENST00000368439 IGHV3-13P01766 116 aa16.2■□□□□ 0.18
CKS1B-203ENST00000368439 IGHV4-31P0DP07 118 aa16.2■□□□□ 0.18
CKS1B-203ENST00000368439 GAAP10253 952 aa16.2■□□□□ 0.18
CKS1B-203ENST00000368439 PPP2R2BQ00005 443 aa16.2■□□□□ 0.18
CKS1B-203ENST00000368439 GGTLC2Q14390 218 aa16.2■□□□□ 0.18
CKS1B-203ENST00000368439 ALKBH6Q3KRA9 238 aa16.2■□□□□ 0.18
CKS1B-203ENST00000368439 C6orf52Q5T4I8 152 aa16.2■□□□□ 0.18
CKS1B-203ENST00000368439 PGM2L1Q6PCE3 622 aa16.2■□□□□ 0.18
CKS1B-203ENST00000368439 VASH1Q7L8A9 365 aaPredicted RBP16.2■□□□□ 0.18
CKS1B-203ENST00000368439 OR6V1Q8N148 313 aa16.2■□□□□ 0.18
CKS1B-203ENST00000368439 LINC00471Q8N535 108 aa16.2■□□□□ 0.18
CKS1B-203ENST00000368439 CCDC124Q96CT7 223 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms