RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 PCK2Q16822 640 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 DEFB133Q30KQ1 61 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 C1orf100Q5SVJ3 147 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 OR7E24Q6IFN5 339 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 TSSK4Q6SA08 328 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 TMEM205Q6UW68 189 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 TMUB2Q71RG4 321 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 BPHLQ86WA6 291 aaPredicted RBP12.84□□□□□ -0.35
CD48-201ENST00000368045 PLXDC1Q8IUK5 500 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 MUC20Q8N307 709 aaPredicted RBP12.84□□□□□ -0.35
CD48-201ENST00000368045 NKAIN3Q8N8D7 197 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 OR4D10Q8NGI6 311 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 OR5M1Q8NGP8 315 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 SCARB1Q8WTV0 552 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 TNFAIP8L1Q8WVP5 186 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 ST8SIA1Q92185 356 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 FOXRED1Q96CU9 486 aaPredicted RBP12.84□□□□□ -0.35
CD48-201ENST00000368045 SEH1LQ96EE3 360 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 CDCP1Q9H5V8 836 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 RDH8Q9NYR8 311 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 TAS2R4Q9NYW5 299 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 DHCR7Q9UBM7 475 aaKnown RBP12.84□□□□□ -0.35
CD48-201ENST00000368045 A0A1B0GX78 115 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 LOC390937A0A1W2PQ73 354 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 CDC14CA4D256 554 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 FTCDNL1E5RQL4 147 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 GOSR2O14653 212 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 LDLRAD4O15165 306 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 AQP8O94778 261 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 HRGP04196 525 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 ZNF35P13682 527 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 ZNF250P15622 560 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 ZNF823P16415 610 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 RAB6AP20340 208 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 DNASE1L1P49184 302 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 ARRB1P49407 418 aaPredicted RBP12.83□□□□□ -0.36
CD48-201ENST00000368045 DAP3P51398 398 aaKnown RBP12.83□□□□□ -0.36
CD48-201ENST00000368045 H2BFSP57053 126 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 COL19A1Q14993 1142 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 TMEM244Q5VVB8 128 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 GPAT4Q86UL3 456 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 KMT5CQ86Y97 462 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 PLPP7Q8NBV4 271 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 PLPP5Q8NEB5 264 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 CADM4Q8NFZ8 388 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 SLC25A44Q96H78 314 aaPredicted RBP12.83□□□□□ -0.36
CD48-201ENST00000368045 VN1R1Q9GZP7 353 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 ZNF224Q9NZL3 707 aa12.83□□□□□ -0.36
CD48-201ENST00000368045 IGHV1OR21-1A0A087WYE8 117 aa12.82□□□□□ -0.36
CD48-201ENST00000368045 ANKUB1A6NFN9 424 aa12.82□□□□□ -0.36
CD48-201ENST00000368045 RAB3DO95716 219 aa12.82□□□□□ -0.36
CD48-201ENST00000368045 CD74P04233 296 aa12.82□□□□□ -0.36
CD48-201ENST00000368045 UBCP0CG48 685 aaKnown RBP12.82□□□□□ -0.36
CD48-201ENST00000368045 COL5A1P20908 1838 aaPredicted RBP12.82□□□□□ -0.36
CD48-201ENST00000368045 EFNA3P52797 238 aa12.82□□□□□ -0.36
CD48-201ENST00000368045 NXPH1P58417 271 aa12.82□□□□□ -0.36
CD48-201ENST00000368045 GLYATL3Q5SZD4 288 aa12.82□□□□□ -0.36
CD48-201ENST00000368045 CHMP1BQ7LBR1 199 aa12.82□□□□□ -0.36
CD48-201ENST00000368045 SLC26A10Q8NG04 563 aa12.82□□□□□ -0.36
CD48-201ENST00000368045 OR13C3Q8NGS6 347 aa12.82□□□□□ -0.36
CD48-201ENST00000368045 MFSD8Q8NHS3 518 aa12.82□□□□□ -0.36
CD48-201ENST00000368045 TPSD1Q9BZJ3 242 aa12.82□□□□□ -0.36
CD48-201ENST00000368045 TMEM138Q9NPI0 162 aa12.82□□□□□ -0.36
CD48-201ENST00000368045 COA3Q9Y2R0 106 aaPredicted RBP12.82□□□□□ -0.36
CD48-201ENST00000368045 SPEF1Q9Y4P9 236 aa12.82□□□□□ -0.36
CD48-201ENST00000368045 SESN1Q9Y6P5 492 aa12.82□□□□□ -0.36
CD48-201ENST00000368045 H3BSH0 61 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 DUX1O43812 170 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 ACSM4P0C7M7 580 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 ATXN8OSP0DMR3 200 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 RPA2P15927 270 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 C4orf46Q504U0 113 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 VWA2Q5GFL6 755 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 CLVS2Q5SYC1 327 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 RAB12Q6IQ22 244 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 TMEM65Q6PI78 240 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.81□□□□□ -0.36
CD48-201ENST00000368045 ASB10Q8WXI3 467 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 WBP1Q96G27 269 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 FOXN4Q96NZ1 517 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 G6PC2Q9NQR9 355 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 OR52A1Q9UKL2 312 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 MKL2Q9ULH7 1088 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 FXYD6-FXYD2A0A087WZ82 144 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 LOC107986453A0A1B0GWG9 222 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 TMEM82A0PJX8 343 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 MFSD2BA6NFX1 497 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 C17orf51A8MQB3 221 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 NPIPA5E9PKD4 350 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 SOX1O00570 391 aaPredicted RBP12.81□□□□□ -0.36
CD48-201ENST00000368045 ADAM10O14672 748 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 ARPC5O15511 151 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 CYB5AP00167 134 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 ZP3P21754 424 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 APOBEC1P41238 236 aaKnown RBP12.81□□□□□ -0.36
CD48-201ENST00000368045 OR1D5P58170 312 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 GPR85P60893 370 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 GK2Q14410 553 aaPredicted RBP12.81□□□□□ -0.36
CD48-201ENST00000368045 MELKQ14680 651 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 MEF2DQ14814 521 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms