RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 WFDC1Q9HC57 220 aa2.42□□□□□ -2.02
RNU6-560P-201ENST00000364007 TNS2Q63HR2 1409 aa2.42□□□□□ -2.02
RNU6-560P-201ENST00000364007 MAPK8IP3Q9UPT6 1336 aa2.42□□□□□ -2.02
RNU6-560P-201ENST00000364007 FAM47DPA6NHR8 397 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 COLCA2A8K830 154 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 RNF13O43567 381 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 SLC25A14O95258 325 aaPredicted RBP2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 MUC1P15941 1255 aaPredicted RBP2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 PSMC3P17980 439 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 RAB3BP20337 219 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 GPX4P36969 197 aaPredicted RBP2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 CDH6P55285 790 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 CHRNA6Q15825 494 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 LY6EQ16553 131 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 XKR7Q5GH72 579 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 PRAMEF20Q5VT98 475 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 FBXW9Q5XUX1 488 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 TMEM205Q6UW68 189 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 ZYG11AQ6WRX3 759 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 KRTAP5-5Q701N2 237 aaPredicted RBP2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 OR56B2PQ8NGI1 322 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 ABHD3Q8WU67 409 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 CNDP1Q96KN2 507 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 SCRT1Q9BWW7 348 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 ILKAPQ9H0C8 392 aaPredicted RBP2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 SAV1Q9H4B6 383 aaPredicted RBP2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 TMEM9BQ9NQ34 198 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 SIRT7Q9NRC8 400 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 SAMSN1Q9NSI8 373 aaKnown RBP2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 ZNRD1Q9P1U0 126 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 TMED5Q9Y3A6 229 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 C2orf16Q68DN1 1984 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 BRCA1P38398 1863 aaKnown RBP2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 AKNAQ7Z591 1439 aa2.41□□□□□ -2.02
RNU6-560P-201ENST00000364007 IGLV1-36A0A0B4J1U3 117 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 A0A1W2PQ67 120 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 AIM2O14862 343 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 NUPL2O15504 423 aaKnown RBP2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 OR2J3O76001 311 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 ACSM4P0C7M7 580 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 CISD3P0C7P0 127 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 UBTFL6P0CB48 400 aaPredicted RBP2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 NPY1RP25929 384 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 CEACAM3P40198 252 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 ARG2P78540 354 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 ADARB1P78563 741 aaKnown RBP2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 LOXL1Q08397 574 aaPredicted RBP2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 PPM1LQ5SGD2 360 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 METTL21CQ5VZV1 264 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 WDR86Q86TI4 376 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 UBALD2Q8IYN6 164 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 OR7G2Q8NG99 324 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 RAB3IL1Q8TBN0 382 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 RNF139Q8WU17 664 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 ELMO1Q92556 727 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 RASD2Q96D21 266 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 SPIN2AQ99865 258 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 SPIN2BQ9BPZ2 258 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 HMG20AQ9NP66 347 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 ZDHHC4Q9NPG8 344 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 TICRRQ7Z2Z1 1910 aa2.4□□□□□ -2.03
RNU6-560P-201ENST00000364007 IGLV1-50A0A075B6I6 118 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 OR2AG2A6NM03 316 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 SGK1O00141 431 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 BET1O15155 118 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 RAD51BO15315 384 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 EIF3HO15372 352 aaKnown RBP eCLIP2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 RBFOX2O43251 390 aaKnown RBP eCLIP2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 KLHL41O60662 606 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 FOXH1O75593 365 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 CIB2O75838 187 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 PABPC4LP0CB38 370 aaKnown RBP2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 CCNB1P14635 433 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 DCKP27707 260 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 FOXN2P32314 431 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 ALKBH6Q3KRA9 238 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 FAM78AQ5JUQ0 283 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 THEM4Q5T1C6 240 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 CCDC183Q5T5S1 534 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 CERS6Q6ZMG9 384 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 PRSS58Q8IYP2 241 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 N4BP2L2Q92802 583 aaPredicted RBP2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 PARP12Q9H0J9 701 aaKnown RBP2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 FAM49BQ9NUQ9 324 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 UXTQ9UBK9 157 aaPredicted RBP2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 CTSFQ9UBX1 484 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 PITPNC1Q9UKF7 332 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 RFNGQ9Y644 331 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 ADAMTS13Q76LX8 1427 aa2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.39□□□□□ -2.03
RNU6-560P-201ENST00000364007 IGKV6-21A0A0C4DH24 114 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 TMEM223A0PJW6 202 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 SMCO3A2RU48 225 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 L7N2F9 121 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 LSM1O15116 133 aaKnown RBP2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 ZNF207O43670 478 aaKnown RBP2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 GCM2O75603 506 aaPredicted RBP2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 VAMP5O95183 116 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 LINC00869P0C866 280 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 TROVE2P10155 538 aaKnown RBP eCLIP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms