RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 LINC00346Q8IVM7 164 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 C12orf76Q8N812 135 aaPredicted RBP14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 AMER3Q8N944 861 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 OR4D6Q8NGJ1 314 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 OR14A16Q8NHC5 309 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 MALSU1Q96EH3 234 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 MMP26Q9NRE1 261 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 SLC22A13Q9Y226 551 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 H3BML4 177 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 EEF1A2Q05639 463 aaKnown RBP14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 RIN1Q13671 783 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 CLINT1Q14677 625 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 ZDHHC12Q96GR4 267 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 SLC25A31Q9H0C2 315 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 OR52A1Q9UKL2 312 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 DAPP1Q9UN19 280 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 CCDC163A0A0D9SF12 145 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 MFSD2BA6NFX1 497 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 FAM74A7A6NL05 159 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 STMND1H3BQB6 276 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 BLVRBP30043 206 aaPredicted RBP14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 RFC3P40938 356 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 CASRP41180 1078 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 FAM74A3Q4VXF1 159 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 PWWP2BQ6NUJ5 590 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 BEND4Q6ZU67 534 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 TMEM229BQ8NBD8 167 aa14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 GAR1Q9NY12 217 aaKnown RBP14.57□□□□□ -0.08
CLSTN1-201ENST00000361311 A0A0A6YYD5 115 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 F5H5K5 113 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 CHRM2P08172 466 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 FCGR2CP31995 323 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 KCNJ3P48549 501 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 FAM160A2Q8N612 972 aaPredicted RBP14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 WDR34Q96EX3 536 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 FAM86C1Q9NVL1 165 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 SLC17A2O00624 439 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 HRH1P35367 487 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 SNU13P55769 128 aaKnown RBP14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 CD200R1LQ6Q8B3 271 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 LILRB2Q8N423 598 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 LFNGQ8NES3 379 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 OR5D18Q8NGL1 313 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 TMPRSS13Q9BYE2 586 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 PRRG4Q9BZD6 226 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 PTGES2Q9H7Z7 377 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 ASH2LQ9UBL3 628 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 A0A0J9YY10 115 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 IDSB3KWA1 339 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 SIGLEC5O15389 551 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 LRP3O75074 770 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 CD37P11049 281 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 ALOX5APP20292 161 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 TM4SF4P48230 202 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 SIGLEC14Q08ET2 396 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 SMAD2Q15796 467 aaKnown RBP14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 C19orf48Q6RUI8 117 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 CCDC54Q8NEL0 328 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 OR4S1Q8NGB4 309 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 OR1J1Q8NGS3 322 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 EDAQ92838 391 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 SLC23A2Q9UGH3 650 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 ING1Q9UK53 422 aaPredicted RBP14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 SF3B6Q9Y3B4 125 aaKnown RBP14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 SIRT4Q9Y6E7 314 aaPredicted RBP14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 DSPPQ9NZW4 1301 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 CRYBA1P05813 215 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 POU3F1Q03052 451 aaPredicted RBP14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 CHRDL2Q6WN34 429 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 MCATQ8IVS2 390 aaKnown RBP14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 UEVLDQ8IX04 471 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 PDE7BQ9NP56 450 aa14.56□□□□□ -0.08
CLSTN1-201ENST00000361311 HNRNPA1P09651 372 aaKnown RBP eCLIP14.55□□□□□ -0.08
CLSTN1-201ENST00000361311 ANKRD34CP0C6C1 535 aa14.55□□□□□ -0.08
CLSTN1-201ENST00000361311 SMIM6P0DI80 62 aa14.55□□□□□ -0.08
CLSTN1-201ENST00000361311 SPP1P10451 314 aa14.55□□□□□ -0.08
CLSTN1-201ENST00000361311 RPL12P30050 165 aaKnown RBP14.55□□□□□ -0.08
CLSTN1-201ENST00000361311 ZNF85Q03923 595 aa14.55□□□□□ -0.08
CLSTN1-201ENST00000361311 NSDHLQ15738 373 aa14.55□□□□□ -0.08
CLSTN1-201ENST00000361311 F5P12259 2224 aa14.55□□□□□ -0.08
CLSTN1-201ENST00000361311 LOC107986453A0A1B0GWG9 222 aa14.55□□□□□ -0.08
CLSTN1-201ENST00000361311 RGS7BPQ6MZT1 257 aaPredicted RBP14.55□□□□□ -0.08
CLSTN1-201ENST00000361311 JAM3Q9BX67 310 aa14.55□□□□□ -0.08
CLSTN1-201ENST00000361311 ZNF160Q9HCG1 818 aa14.55□□□□□ -0.08
CLSTN1-201ENST00000361311 RPS2P15880 293 aaKnown RBP14.55□□□□□ -0.08
CLSTN1-201ENST00000361311 LIMS1P48059 325 aa14.55□□□□□ -0.08
CLSTN1-201ENST00000361311 RAB30Q15771 203 aa14.55□□□□□ -0.08
CLSTN1-201ENST00000361311 RAB39BQ96DA2 213 aa14.55□□□□□ -0.08
CLSTN1-201ENST00000361311 SLX1AQ9BQ83 275 aa14.55□□□□□ -0.08
CLSTN1-201ENST00000361311 TUBG2Q9NRH3 451 aa14.55□□□□□ -0.08
CLSTN1-201ENST00000361311 MIOXQ9UGB7 285 aa14.55□□□□□ -0.08
CLSTN1-201ENST00000361311 APOBEC3BQ9UH17 382 aaKnown RBP14.55□□□□□ -0.08
CLSTN1-201ENST00000361311 B3GALT5Q9Y2C3 310 aa14.55□□□□□ -0.08
CLSTN1-201ENST00000361311 NUDT21O43809 227 aaKnown RBP14.54□□□□□ -0.08
CLSTN1-201ENST00000361311 SLC35E2P0CK97 266 aa14.54□□□□□ -0.08
CLSTN1-201ENST00000361311 EPHA1P21709 976 aa14.54□□□□□ -0.08
CLSTN1-201ENST00000361311 RAB38P57729 211 aa14.54□□□□□ -0.08
CLSTN1-201ENST00000361311 RAB1AP62820 205 aa14.54□□□□□ -0.08
CLSTN1-201ENST00000361311 HHEXQ03014 270 aa14.54□□□□□ -0.08
CLSTN1-201ENST00000361311 ANKRD16Q6P6B7 361 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms