RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 STT3BQ8TCJ2 826 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 HINT3Q9NQE9 182 aaKnown RBP12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 RNF150Q9ULK6 438 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 PPT2Q9UMR5 302 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 FZD9O00144 591 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 SSSCA1O60232 199 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 PRKRAO75569 313 aaKnown RBP12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 CNMDO75829 334 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 C1SP09871 688 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 TNFSF4P23510 183 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 NTSR1P30989 418 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 GABREP78334 506 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 FAM162BQ5T6X4 162 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 C9orf135Q5VTT2 229 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 C5orf46Q6UWT4 87 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 PARS2Q7L3T8 475 aaKnown RBP12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 OR2L13Q8N349 312 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 KIAA1958Q8N8K9 716 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 TMEM40Q8WWA1 233 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 ZNRF4Q8WWF5 429 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 SCMH1Q96GD3 660 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 BCO1Q9HAY6 547 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 GLTPD2A6NH11 291 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 K7EQM0 130 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 HNRNPA1P09651 372 aaKnown RBP eCLIP12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 POU3F3P20264 500 aaPredicted RBP12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 LYG2Q86SG7 212 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 RIMKLAQ8IXN7 391 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 FAM71CQ8NEG0 241 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 CRYGNQ8WXF5 182 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 Q96M85 177 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 ZNF85Q03923 595 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 TIGITQ495A1 244 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 OR13C5Q8NGS8 318 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 C2orf50Q96LR7 162 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 RHNO1Q9BSD3 238 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 UCK1Q9HA47 277 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 RPL13AP40429 203 aaKnown RBP12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 RPL29P47914 159 aaKnown RBP12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 CSNK1DP48730 415 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 MS4A8Q9BY19 250 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 PLA2G12AQ9BZM1 189 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 ACTR3CQ9C0K3 210 aaPredicted RBP12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 POMT1Q9Y6A1 747 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 IFITM5A6NNB3 132 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 EDN3P14138 238 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 PI3P19957 117 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 TMEM176BQ3YBM2 270 aaPredicted RBP12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 C1QTNF12Q5T7M4 302 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 USP51Q70EK9 711 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 ARHGDIGQ99819 225 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 TGFBR3Q03167 851 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 ABHD17BQ5VST6 288 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 GGNBP1Q5YKI7 109 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 SLC16A12Q6ZSM3 486 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 TIPARPQ7Z3E1 657 aaKnown RBP12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 ADIPOR2Q86V24 386 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 THNSL2Q86YJ6 484 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 ZNF485Q8NCK3 441 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 OR5K2Q8NHB8 316 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 SLC46A1Q96NT5 459 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 WDR83Q9BRX9 315 aaKnown RBP12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 LYRM2Q9NU23 88 aaPredicted RBP12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 TMED7-TICAM2A0A0A6YYA0 188 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 SLC2A10O95528 541 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 SOX18P35713 384 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 CDK5Q00535 292 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 RUNX3Q13761 415 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 FAM71E1Q6IPT2 247 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 TMEFF1Q8IYR6 380 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 C12orf76Q8N812 135 aaPredicted RBP12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 CLSTN3Q9BQT9 956 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 SOX7Q9BT81 388 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 GABRQQ9UN88 632 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 TRAPPC4Q9Y296 219 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 TMED7Q9Y3B3 224 aa12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 YTHDF2Q9Y5A9 579 aaKnown RBP12.3□□□□□ -0.44
CCDC144A-203ENST00000360495 TRBV11-1A0A0K0K1C0 115 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 SEMA4FO95754 770 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 SPANXN5Q5MJ07 72 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 ZNF852Q6ZMS4 543 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 TMEM179BQ7Z7N9 219 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 ZNF740Q8NDX6 193 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 OR2A14Q96R47 310 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 SLIRPQ9GZT3 109 aaKnown RBP12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 ZNF385DQ9H6B1 395 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 LHX3Q9UBR4 397 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 A6NCN8 305 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 RAB38P57729 211 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 LINC00303Q3SY05 128 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 PIGLQ9Y2B2 252 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 SSUH2Q9Y2M2 353 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 RAB27BO00194 218 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 SDCBPO00560 298 aaPredicted RBP12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 HRO43593 1189 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 CTNSO60931 367 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 GSK3AP49840 483 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 DOC2BQ14184 412 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 TMEM81Q6P7N7 255 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 ZFPM2Q8WW38 1151 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms