RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 OR11A1Q9GZK7 315 aa12.06□□□□□ -0.48
NCDN-201ENST00000356090 WDR13Q9H1Z4 485 aa12.06□□□□□ -0.48
NCDN-201ENST00000356090 SHPKQ9UHJ6 478 aa12.06□□□□□ -0.48
NCDN-201ENST00000356090 C2orf72A6NCS6 295 aa12.06□□□□□ -0.48
NCDN-201ENST00000356090 F8W036 122 aa12.06□□□□□ -0.48
NCDN-201ENST00000356090 AGPAT2O15120 278 aa12.06□□□□□ -0.48
NCDN-201ENST00000356090 UTS2O95399 124 aa12.06□□□□□ -0.48
NCDN-201ENST00000356090 PMS2P2O95744 297 aa12.06□□□□□ -0.48
NCDN-201ENST00000356090 ZNF823P16415 610 aa12.06□□□□□ -0.48
NCDN-201ENST00000356090 BLOC1S1P78537 153 aa12.06□□□□□ -0.48
NCDN-201ENST00000356090 MFGE8Q08431 387 aaPredicted RBP12.06□□□□□ -0.48
NCDN-201ENST00000356090 MOGAT2Q3SYC2 334 aa12.06□□□□□ -0.48
NCDN-201ENST00000356090 SLC22A6Q4U2R8 563 aa12.06□□□□□ -0.48
NCDN-201ENST00000356090 FAM109BQ6ICB4 259 aaPredicted RBP12.06□□□□□ -0.48
NCDN-201ENST00000356090 OR2W3Q7Z3T1 314 aa12.06□□□□□ -0.48
NCDN-201ENST00000356090 HSD17B13Q7Z5P4 300 aaPredicted RBP12.06□□□□□ -0.48
NCDN-201ENST00000356090 CDC20BQ86Y33 519 aa12.06□□□□□ -0.48
NCDN-201ENST00000356090 CCDC36Q8IYA8 594 aa12.06□□□□□ -0.48
NCDN-201ENST00000356090 ZNF101Q8IZC7 436 aa12.06□□□□□ -0.48
NCDN-201ENST00000356090 OR1S2Q8NGQ3 325 aa12.06□□□□□ -0.48
NCDN-201ENST00000356090 LRFN5Q96NI6 719 aa12.06□□□□□ -0.48
NCDN-201ENST00000356090 EXOSC3Q9NQT5 275 aaKnown RBP12.06□□□□□ -0.48
NCDN-201ENST00000356090 POLR1DQ9Y2S0 133 aa12.06□□□□□ -0.48
NCDN-201ENST00000356090 ASXL3Q9C0F0 2248 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 SLC17A2O00624 439 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 TNFP01375 233 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 PVALBP20472 110 aaPredicted RBP12.05□□□□□ -0.48
NCDN-201ENST00000356090 FBXW4P57775 412 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 ACKR1Q16570 336 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 ZFP82Q8N141 532 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 GTPBP8Q8N3Z3 284 aaPredicted RBP12.05□□□□□ -0.48
NCDN-201ENST00000356090 FAM160A2Q8N612 972 aaPredicted RBP12.05□□□□□ -0.48
NCDN-201ENST00000356090 C2CD4CQ8TF44 421 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 THAP3Q8WTV1 239 aaPredicted RBP12.05□□□□□ -0.48
NCDN-201ENST00000356090 DCUN1D4Q92564 292 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 NPAS1Q99742 590 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 LMF2Q9BU23 707 aaKnown RBP12.05□□□□□ -0.48
NCDN-201ENST00000356090 ZNF275Q9NSD4 429 aaPredicted RBP12.05□□□□□ -0.48
NCDN-201ENST00000356090 PCDHB10Q9UN67 800 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 UNC13CQ8NB66 2214 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 MGMTP16455 207 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 PI3P19957 117 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 AKT2P31751 481 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 NR0B1P51843 470 aaKnown RBP12.05□□□□□ -0.48
NCDN-201ENST00000356090 IL10RAQ13651 578 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 NR0B2Q15466 257 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 ZNF141Q15928 474 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 PDSS1Q5T2R2 415 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 ATPAF1Q5TC12 328 aaPredicted RBP12.05□□□□□ -0.48
NCDN-201ENST00000356090 TMEM225Q6GV28 225 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 KCTD18Q6PI47 426 aaPredicted RBP12.05□□□□□ -0.48
NCDN-201ENST00000356090 BIVMQ86UB2 503 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 CLEC1AQ8NC01 280 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 CLRN3Q8NCR9 226 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 SEH1LQ96EE3 360 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 SFXN1Q9H9B4 322 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 MBD2Q9UBB5 411 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 HIF3AQ9Y2N7 669 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 P2RY10O00398 339 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 HPP00738 406 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 OPN1LWP04000 364 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 ARRB1P49407 418 aaPredicted RBP12.05□□□□□ -0.48
NCDN-201ENST00000356090 PMPCAQ10713 525 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 SNTB1Q13884 538 aaKnown RBP12.05□□□□□ -0.48
NCDN-201ENST00000356090 CCDC157Q569K6 752 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 PAPD4Q6PIY7 484 aaKnown RBP12.05□□□□□ -0.48
NCDN-201ENST00000356090 SHISA6Q6ZSJ9 500 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 TTLL10Q6ZVT0 673 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 TRAPPC6BQ86SZ2 158 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 CBLN2Q8IUK8 224 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 OR6K3Q8NGY3 331 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 WBP1Q96G27 269 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 PRR13Q9NZ81 148 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 GDE1Q9NZC3 331 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 GSKIPQ9P0R6 139 aa12.05□□□□□ -0.48
NCDN-201ENST00000356090 ARPC4-TTLL3A0A0A6YYG9 625 aa12.04□□□□□ -0.48
NCDN-201ENST00000356090 TRBV5-5A0A0J9YX44 114 aa12.04□□□□□ -0.48
NCDN-201ENST00000356090 K7EQS6 105 aa12.04□□□□□ -0.48
NCDN-201ENST00000356090 TNFSF14O43557 240 aa12.04□□□□□ -0.48
NCDN-201ENST00000356090 LMX1BO60663 402 aa12.04□□□□□ -0.48
NCDN-201ENST00000356090 RPA2P15927 270 aa12.04□□□□□ -0.48
NCDN-201ENST00000356090 CNR1P21554 472 aa12.04□□□□□ -0.48
NCDN-201ENST00000356090 FGL1Q08830 312 aa12.04□□□□□ -0.48
NCDN-201ENST00000356090 SLC17A1Q14916 467 aa12.04□□□□□ -0.48
NCDN-201ENST00000356090 TFAP2EQ6VUC0 442 aa12.04□□□□□ -0.48
NCDN-201ENST00000356090 LINC00114Q6XXX2 140 aa12.04□□□□□ -0.48
NCDN-201ENST00000356090 SLC43A2Q8N370 569 aa12.04□□□□□ -0.48
NCDN-201ENST00000356090 OTOSQ8NHW6 89 aa12.04□□□□□ -0.48
NCDN-201ENST00000356090 TGM7Q96PF1 710 aa12.04□□□□□ -0.48
NCDN-201ENST00000356090 PELOQ9BRX2 385 aaKnown RBP12.04□□□□□ -0.48
NCDN-201ENST00000356090 COA3Q9Y2R0 106 aaPredicted RBP12.04□□□□□ -0.48
NCDN-201ENST00000356090 TRAV14DV4A0A0A6YYC5 116 aa12.04□□□□□ -0.48
NCDN-201ENST00000356090 A0A0D9SG52 128 aa12.04□□□□□ -0.48
NCDN-201ENST00000356090 RAB3AP20336 220 aa12.04□□□□□ -0.48
NCDN-201ENST00000356090 DHODHQ02127 395 aa12.04□□□□□ -0.48
NCDN-201ENST00000356090 ZP2Q05996 745 aa12.04□□□□□ -0.48
NCDN-201ENST00000356090 AIMP2Q13155 320 aaKnown RBP12.04□□□□□ -0.48
NCDN-201ENST00000356090 PPP1R1AQ13522 171 aa12.04□□□□□ -0.48
NCDN-201ENST00000356090 TMED6Q8WW62 240 aa12.04□□□□□ -0.48
NCDN-201ENST00000356090 C5orf34Q96MH7 638 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms