RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 SIRT4Q9Y6E7 314 aaPredicted RBP8.48□□□□□ -1.05
NPHP1-202ENST00000355301 PNMA8CA0A1B0GUJ8 204 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 CD8B2A6NJW9 211 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 RPL36A-HNRNPH2H7BZ11 118 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 PSMD9O00233 223 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 SLC22A1O15245 554 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 OGG1O15527 345 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 ATE1O95260 518 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 OR8G3PP0DMU2 310 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 GABRA1P14867 456 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 CD53P19397 219 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 NPR2P20594 1047 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 MSR1P21757 451 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 NR4A1P22736 598 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 GABRA5P31644 462 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 TGM4P49221 684 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 TDGF1P3P51864 188 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 SIRPAP78324 504 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 GUSBP1Q15486 140 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 FAM27BQ5VT28 67 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 LIPNQ5VXI9 398 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 NSUN5P2Q63ZY6 315 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 DMKNQ6E0U4 476 aaPredicted RBP8.47□□□□□ -1.05
NPHP1-202ENST00000355301 RPL22L1Q6P5R6 122 aaKnown RBP8.47□□□□□ -1.05
NPHP1-202ENST00000355301 RPTNQ6XPR3 784 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 GDPGP1Q6ZNW5 385 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 RHOUQ7L0Q8 258 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 FAM220AQ7Z4H9 259 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 DCXRQ7Z4W1 244 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 LINC00346Q8IVM7 164 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 CISD2Q8N5K1 135 aaKnown RBP8.47□□□□□ -1.05
NPHP1-202ENST00000355301 TEX19Q8NA77 164 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 RNF166Q96A37 237 aaPredicted RBP8.47□□□□□ -1.05
NPHP1-202ENST00000355301 APH1AQ96BI3 265 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 SLX1AQ9BQ83 275 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 OR51E2Q9H255 320 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 GPR35Q9HC97 309 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 EMC7Q9NPA0 242 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 SLC7A10Q9NS82 523 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 SLCO1C1Q9NYB5 712 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 ST6GALNAC2Q9UJ37 374 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 IKZF2Q9UKS7 526 aa8.47□□□□□ -1.05
NPHP1-202ENST00000355301 PHF3Q92576 2039 aaKnown RBP8.47□□□□□ -1.05
NPHP1-202ENST00000355301 WDR1O75083 606 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 CD1AP06126 327 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 PTGER4P35408 488 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 CRYBB2P43320 205 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 ROR2Q01974 943 aaKnown RBP8.46□□□□□ -1.05
NPHP1-202ENST00000355301 AQP6Q13520 282 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 CDK5R1Q15078 307 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 SGCAQ16586 387 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 NRN1LQ496H8 165 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 OR2A2Q6IF42 318 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 CD200R1LQ6Q8B3 271 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 CORO6Q6QEF8 472 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 DEGS2Q6QHC5 323 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 LRRN1Q6UXK5 716 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.46□□□□□ -1.05
NPHP1-202ENST00000355301 NUFIP2Q7Z417 695 aaKnown RBP8.46□□□□□ -1.05
NPHP1-202ENST00000355301 YIPF7Q8N8F6 280 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 RPS4Y2Q8TD47 263 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 RNF133Q8WVZ7 376 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 HTRA1Q92743 480 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 SNRNP40Q96DI7 357 aaKnown RBP8.46□□□□□ -1.05
NPHP1-202ENST00000355301 SMIM19Q96E16 107 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 MAP6Q96JE9 813 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 ZNF416Q9BWM5 594 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 SLC25A18Q9H1K4 315 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 C1orf198Q9H425 327 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 SIAEQ9HAT2 523 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 TMEM38BQ9NVV0 291 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 ASH2LQ9UBL3 628 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 GDF2Q9UK05 429 aaPredicted RBP8.46□□□□□ -1.05
NPHP1-202ENST00000355301 STUB1Q9UNE7 303 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 GRIP1Q9Y3R0 1128 aa8.46□□□□□ -1.05
NPHP1-202ENST00000355301 TLN1Q9Y490 2541 aaKnown RBP8.46□□□□□ -1.05
NPHP1-202ENST00000355301 MED12LQ86YW9 2145 aa8.46□□□□□ -1.06
NPHP1-202ENST00000355301 LOC100506127A0A0U1RQW1 187 aa8.46□□□□□ -1.06
NPHP1-202ENST00000355301 FIGNL2A6NMB9 653 aa8.46□□□□□ -1.06
NPHP1-202ENST00000355301 LRRTM2O43300 516 aa8.46□□□□□ -1.06
NPHP1-202ENST00000355301 ZNF254O75437 659 aa8.46□□□□□ -1.06
NPHP1-202ENST00000355301 GPX5O75715 221 aa8.46□□□□□ -1.06
NPHP1-202ENST00000355301 KRT33AO76009 404 aa8.46□□□□□ -1.06
NPHP1-202ENST00000355301 WNT11O96014 354 aa8.46□□□□□ -1.06
NPHP1-202ENST00000355301 HLA-DPB1P04440 258 aa8.46□□□□□ -1.06
NPHP1-202ENST00000355301 PCSK6P29122 969 aa8.46□□□□□ -1.06
NPHP1-202ENST00000355301 OPRL1P41146 370 aa8.46□□□□□ -1.06
NPHP1-202ENST00000355301 VBP1P61758 197 aa8.46□□□□□ -1.06
NPHP1-202ENST00000355301 NCS1P62166 190 aa8.46□□□□□ -1.06
NPHP1-202ENST00000355301 LSM3P62310 102 aaKnown RBP8.46□□□□□ -1.06
NPHP1-202ENST00000355301 RPS25P62851 125 aaKnown RBP8.46□□□□□ -1.06
NPHP1-202ENST00000355301 ENDOGQ14249 297 aaKnown RBP8.46□□□□□ -1.06
NPHP1-202ENST00000355301 CEACAM16Q2WEN9 425 aa8.46□□□□□ -1.06
NPHP1-202ENST00000355301 ZNF585AQ6P3V2 769 aa8.46□□□□□ -1.06
NPHP1-202ENST00000355301 FAM214BQ7L5A3 538 aa8.46□□□□□ -1.06
NPHP1-202ENST00000355301 ZNF627Q7L945 461 aa8.46□□□□□ -1.06
NPHP1-202ENST00000355301 KRT77Q7Z794 578 aa8.46□□□□□ -1.06
NPHP1-202ENST00000355301 ZNF100Q8IYN0 542 aa8.46□□□□□ -1.06
NPHP1-202ENST00000355301 OR2AJ1Q8NGZ0 328 aa8.46□□□□□ -1.06
NPHP1-202ENST00000355301 TMEM203Q969S6 136 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms