RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 HTRA1Q92743 480 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 WNT2BQ93097 391 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 GPR35Q9HC97 309 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 SS18L1O75177 396 aaPredicted RBP13.76□□□□□ -0.21
CTSA-202ENST00000354880 IGHV3-9P01782 118 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 TPOP07202 933 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 TDGF1P3P51864 188 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 LSM6P62312 80 aaKnown RBP13.76□□□□□ -0.21
CTSA-202ENST00000354880 MRPS34P82930 218 aaKnown RBP13.76□□□□□ -0.21
CTSA-202ENST00000354880 ROM1Q03395 351 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 GPR50Q13585 617 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 CEACAM16Q2WEN9 425 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 NSUN5P2Q63ZY6 315 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 CORO6Q6QEF8 472 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 NUFIP2Q7Z417 695 aaKnown RBP13.76□□□□□ -0.21
CTSA-202ENST00000354880 ZNF100Q8IYN0 542 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 ZNF679Q8IYX0 411 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 YIPF7Q8N8F6 280 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 OR52N5Q8NH56 324 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 ST7LQ8TDW4 575 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 RPL3LQ92901 407 aaKnown RBP13.76□□□□□ -0.21
CTSA-202ENST00000354880 NABP1Q96AH0 204 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 SNRNP40Q96DI7 357 aaKnown RBP13.76□□□□□ -0.21
CTSA-202ENST00000354880 OR8B4Q96RC9 309 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 MROQ9BYG7 248 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 SLC25A18Q9H1K4 315 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 OR51E2Q9H255 320 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 SLC7A10Q9NS82 523 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 SLCO1C1Q9NYB5 712 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 GRIP1Q9Y3R0 1128 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 LHFPL6Q9Y693 200 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 SIRT4Q9Y6E7 314 aaPredicted RBP13.76□□□□□ -0.21
CTSA-202ENST00000354880 SPTA1P02549 2419 aa13.75□□□□□ -0.21
CTSA-202ENST00000354880 NCOA6Q14686 2063 aaPredicted RBP13.75□□□□□ -0.21
CTSA-202ENST00000354880 ABHD16AO95870 558 aa13.75□□□□□ -0.21
CTSA-202ENST00000354880 GABRA1P14867 456 aa13.75□□□□□ -0.21
CTSA-202ENST00000354880 NPR2P20594 1047 aa13.75□□□□□ -0.21
CTSA-202ENST00000354880 SIRPAP78324 504 aa13.75□□□□□ -0.21
CTSA-202ENST00000354880 ROR2Q01974 943 aaKnown RBP13.75□□□□□ -0.21
CTSA-202ENST00000354880 CCDC58Q4VC31 144 aa13.75□□□□□ -0.21
CTSA-202ENST00000354880 LIPNQ5VXI9 398 aa13.75□□□□□ -0.21
CTSA-202ENST00000354880 LRRN1Q6UXK5 716 aa13.75□□□□□ -0.21
CTSA-202ENST00000354880 RPTNQ6XPR3 784 aa13.75□□□□□ -0.21
CTSA-202ENST00000354880 KRT77Q7Z794 578 aa13.75□□□□□ -0.21
CTSA-202ENST00000354880 OR2AJ1Q8NGZ0 328 aa13.75□□□□□ -0.21
CTSA-202ENST00000354880 HAVCR2Q8TDQ0 301 aa13.75□□□□□ -0.21
CTSA-202ENST00000354880 SLX1AQ9BQ83 275 aa13.75□□□□□ -0.21
CTSA-202ENST00000354880 C1orf198Q9H425 327 aa13.75□□□□□ -0.21
CTSA-202ENST00000354880 TPRP12270 2363 aaKnown RBP13.75□□□□□ -0.21
CTSA-202ENST00000354880 DOCK7Q96N67 2140 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 CD8B2A6NJW9 211 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 FIGNL2A6NMB9 653 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 HSPB2A8KAH6 182 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 PLPP2O43688 288 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 WDR1O75083 606 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 GABRA5P31644 462 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 LSM3P62310 102 aaKnown RBP13.74□□□□□ -0.21
CTSA-202ENST00000354880 KLRB1Q12918 225 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 MRPL28Q13084 256 aaKnown RBP13.74□□□□□ -0.21
CTSA-202ENST00000354880 HSPB2Q16082 182 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 SPATC1Q76KD6 591 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 GCNT2Q8N0V5 402 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 C9orf106Q8NAJ2 232 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 FOXB1Q99853 325 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 CHCHD6Q9BRQ6 235 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 ZNF416Q9BWM5 594 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 C12orf49Q9H741 205 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 SIAEQ9HAT2 523 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 ELOVL3Q9HB03 270 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 TMEM38BQ9NVV0 291 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 ASH2LQ9UBL3 628 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 UPB1Q9UBR1 384 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 ST6GALNAC2Q9UJ37 374 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 GDF2Q9UK05 429 aaPredicted RBP13.74□□□□□ -0.21
CTSA-202ENST00000354880 STUB1Q9UNE7 303 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 SF3B6Q9Y3B4 125 aaKnown RBP13.74□□□□□ -0.21
CTSA-202ENST00000354880 LOC100506127A0A0U1RQW1 187 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 ZNF587BE7ETH6 402 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 RPL36A-HNRNPH2H7BZ11 118 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 OGG1O15527 345 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 LRRTM2O43300 516 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 RPP14O95059 124 aaKnown RBP13.74□□□□□ -0.21
CTSA-202ENST00000354880 ATE1O95260 518 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 ABOP16442 354 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 PTGER4P35408 488 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 PSMB10P40306 273 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 TGM4P49221 684 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 CDK5R1Q15078 307 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 GUSBP1Q15486 140 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 STK11Q15831 433 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 DMKNQ6E0U4 476 aaPredicted RBP13.74□□□□□ -0.21
CTSA-202ENST00000354880 OR2A2Q6IF42 318 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 RPL22L1Q6P5R6 122 aaKnown RBP13.74□□□□□ -0.21
CTSA-202ENST00000354880 ARL9Q6T311 187 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 FAM214BQ7L5A3 538 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 CD163Q86VB7 1156 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 FAM57AQ8TBR7 257 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 RNF133Q8WVZ7 376 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 TMEM203Q969S6 136 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 MAP6Q96JE9 813 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms