RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 ACSM3Q53FZ2 586 aa16.52■□□□□ 0.24
PTN-201ENST00000348225 YIF1BQ5BJH7 314 aa16.52■□□□□ 0.24
PTN-201ENST00000348225 PHYHD1Q5SRE7 291 aa16.52■□□□□ 0.24
PTN-201ENST00000348225 FDX2Q6P4F2 183 aa16.52■□□□□ 0.24
PTN-201ENST00000348225 FOXL2NBQ6ZUU3 175 aa16.52■□□□□ 0.24
PTN-201ENST00000348225 GPR137CQ8N3F9 429 aa16.52■□□□□ 0.24
PTN-201ENST00000348225 NXF2Q9GZY0 626 aaKnown RBP16.52■□□□□ 0.24
PTN-201ENST00000348225 NELFAQ9H3P2 528 aa16.52■□□□□ 0.24
PTN-201ENST00000348225 RNF122Q9H9V4 155 aa16.52■□□□□ 0.24
PTN-201ENST00000348225 EMC7Q9NPA0 242 aa16.52■□□□□ 0.24
PTN-201ENST00000348225 ZNF281Q9Y2X9 895 aa16.52■□□□□ 0.24
PTN-201ENST00000348225 NOSIPQ9Y314 301 aaKnown RBP16.52■□□□□ 0.24
PTN-201ENST00000348225 LRP12Q9Y561 859 aa16.52■□□□□ 0.24
PTN-201ENST00000348225 VGLL3A8MV65 326 aa16.52■□□□□ 0.23
PTN-201ENST00000348225 CASKO14936 926 aa16.52■□□□□ 0.23
PTN-201ENST00000348225 SC5DO75845 299 aa16.52■□□□□ 0.23
PTN-201ENST00000348225 GATBO75879 557 aaKnown RBP16.52■□□□□ 0.23
PTN-201ENST00000348225 SDC2P34741 201 aa16.52■□□□□ 0.23
PTN-201ENST00000348225 NANOS3P60323 173 aaKnown RBP16.52■□□□□ 0.23
PTN-201ENST00000348225 C3AR1Q16581 482 aa16.52■□□□□ 0.23
PTN-201ENST00000348225 Q6ZS92 163 aa16.52■□□□□ 0.23
PTN-201ENST00000348225 SPATC1Q76KD6 591 aa16.52■□□□□ 0.23
PTN-201ENST00000348225 CEACAM19Q7Z692 300 aa16.52■□□□□ 0.23
PTN-201ENST00000348225 MCEMP1Q8IX19 187 aa16.52■□□□□ 0.23
PTN-201ENST00000348225 OR2G2Q8NGZ5 317 aa16.52■□□□□ 0.23
PTN-201ENST00000348225 OR5AK2Q8NH90 309 aa16.52■□□□□ 0.23
PTN-201ENST00000348225 FNDC9Q8TBE3 224 aa16.52■□□□□ 0.23
PTN-201ENST00000348225 RNF133Q8WVZ7 376 aa16.52■□□□□ 0.23
PTN-201ENST00000348225 HSD17B8Q92506 261 aa16.52■□□□□ 0.23
PTN-201ENST00000348225 RNF166Q96A37 237 aaPredicted RBP16.52■□□□□ 0.23
PTN-201ENST00000348225 SLC25A46Q96AG3 418 aa16.52■□□□□ 0.23
PTN-201ENST00000348225 DCBLD2Q96PD2 775 aa16.52■□□□□ 0.23
PTN-201ENST00000348225 RBM24Q9BX46 236 aaKnown RBP16.52■□□□□ 0.23
PTN-201ENST00000348225 COMMD4Q9H0A8 199 aa16.52■□□□□ 0.23
PTN-201ENST00000348225 PARPBPQ9NWS1 579 aa16.52■□□□□ 0.23
PTN-201ENST00000348225 DCHS1Q96JQ0 3298 aa16.51■□□□□ 0.23
PTN-201ENST00000348225 TNRC6AQ8NDV7 1962 aaKnown RBP16.51■□□□□ 0.23
PTN-201ENST00000348225 ZNF407Q9C0G0 2248 aa16.51■□□□□ 0.23
PTN-201ENST00000348225 A0A1B0GVC2 190 aa16.51■□□□□ 0.23
PTN-201ENST00000348225 TMEM212A6NML5 194 aa16.51■□□□□ 0.23
PTN-201ENST00000348225 ZNF724A8MTY0 619 aa16.51■□□□□ 0.23
PTN-201ENST00000348225 K7ENP7 123 aa16.51■□□□□ 0.23
PTN-201ENST00000348225 AQP7O14520 342 aa16.51■□□□□ 0.23
PTN-201ENST00000348225 MRPL33O75394 65 aaKnown RBP16.51■□□□□ 0.23
PTN-201ENST00000348225 H2BFMP0C1H6 154 aa16.51■□□□□ 0.23
PTN-201ENST00000348225 MYL9P24844 172 aa16.51■□□□□ 0.23
PTN-201ENST00000348225 MTNR1BP49286 362 aa16.51■□□□□ 0.23
PTN-201ENST00000348225 ROR2Q01974 943 aaKnown RBP16.51■□□□□ 0.23
PTN-201ENST00000348225 MXD1Q05195 221 aa16.51■□□□□ 0.23
PTN-201ENST00000348225 INSL4Q14641 139 aa16.51■□□□□ 0.23
PTN-201ENST00000348225 SGCAQ16586 387 aa16.51■□□□□ 0.23
PTN-201ENST00000348225 RIPPLY2Q5TAB7 128 aa16.51■□□□□ 0.23
PTN-201ENST00000348225 OR7E24Q6IFN5 339 aa16.51■□□□□ 0.23
PTN-201ENST00000348225 INO80CQ6PI98 192 aaPredicted RBP16.51■□□□□ 0.23
PTN-201ENST00000348225 CORO6Q6QEF8 472 aa16.51■□□□□ 0.23
PTN-201ENST00000348225 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.51■□□□□ 0.23
PTN-201ENST00000348225 PHYHIPQ92561 330 aa16.51■□□□□ 0.23
PTN-201ENST00000348225 SLAMF6Q96DU3 332 aa16.51■□□□□ 0.23
PTN-201ENST00000348225 PDCD1LG2Q9BQ51 273 aa16.51■□□□□ 0.23
PTN-201ENST00000348225 BCO1Q9HAY6 547 aa16.51■□□□□ 0.23
PTN-201ENST00000348225 GDF2Q9UK05 429 aaPredicted RBP16.51■□□□□ 0.23
PTN-201ENST00000348225 LHFPL6Q9Y693 200 aa16.51■□□□□ 0.23
PTN-201ENST00000348225 OR6C65A6NJZ3 312 aa16.5■□□□□ 0.23
PTN-201ENST00000348225 ARL6IP5O75915 188 aa16.5■□□□□ 0.23
PTN-201ENST00000348225 ZFPL1O95159 310 aa16.5■□□□□ 0.23
PTN-201ENST00000348225 FCGR2AP12318 317 aa16.5■□□□□ 0.23
PTN-201ENST00000348225 NPR2P20594 1047 aa16.5■□□□□ 0.23
PTN-201ENST00000348225 CALRP27797 417 aaKnown RBP16.5■□□□□ 0.23
PTN-201ENST00000348225 CCR9P51686 369 aa16.5■□□□□ 0.23
PTN-201ENST00000348225 DYNC1I2Q13409 638 aaKnown RBP16.5■□□□□ 0.23
PTN-201ENST00000348225 TEX19Q8NA77 164 aa16.5■□□□□ 0.23
PTN-201ENST00000348225 OR6Q1Q8NGQ2 317 aa16.5■□□□□ 0.23
PTN-201ENST00000348225 CPT1CQ8TCG5 803 aa16.5■□□□□ 0.23
PTN-201ENST00000348225 C4orf45Q96LM5 186 aa16.5■□□□□ 0.23
PTN-201ENST00000348225 C6orf62Q9GZU0 229 aaPredicted RBP16.5■□□□□ 0.23
PTN-201ENST00000348225 PRDM14Q9GZV8 571 aa16.5■□□□□ 0.23
PTN-201ENST00000348225 TPK1Q9H3S4 243 aa16.5■□□□□ 0.23
PTN-201ENST00000348225 FRRS1LQ9P0K9 344 aa16.5■□□□□ 0.23
PTN-201ENST00000348225 CRNNQ9UBG3 495 aaPredicted RBP16.5■□□□□ 0.23
PTN-201ENST00000348225 ASH2LQ9UBL3 628 aa16.5■□□□□ 0.23
PTN-201ENST00000348225 ZNF175Q9Y473 711 aa16.5■□□□□ 0.23
PTN-201ENST00000348225 SPTBN2O15020 2390 aa16.49■□□□□ 0.23
PTN-201ENST00000348225 WNT11O96014 354 aa16.49■□□□□ 0.23
PTN-201ENST00000348225 NTF4P34130 210 aa16.49■□□□□ 0.23
PTN-201ENST00000348225 OPRL1P41146 370 aa16.49■□□□□ 0.23
PTN-201ENST00000348225 UCNP55089 124 aa16.49■□□□□ 0.23
PTN-201ENST00000348225 MRPS34P82930 218 aaKnown RBP16.49■□□□□ 0.23
PTN-201ENST00000348225 INAQ16352 499 aa16.49■□□□□ 0.23
PTN-201ENST00000348225 ZMAT1Q5H9K5 638 aa16.49■□□□□ 0.23
PTN-201ENST00000348225 RHOUQ7L0Q8 258 aa16.49■□□□□ 0.23
PTN-201ENST00000348225 ZNF676Q8N7Q3 588 aa16.49■□□□□ 0.23
PTN-201ENST00000348225 OR13C5Q8NGS8 318 aa16.49■□□□□ 0.23
PTN-201ENST00000348225 S100ZQ8WXG8 99 aa16.49■□□□□ 0.23
PTN-201ENST00000348225 MAP6Q96JE9 813 aa16.49■□□□□ 0.23
PTN-201ENST00000348225 CENPMQ9NSP4 180 aa16.49■□□□□ 0.23
PTN-201ENST00000348225 R4GMQ9 66 aa16.49■□□□□ 0.23
PTN-201ENST00000348225 DNAJC13O75165 2243 aa16.49■□□□□ 0.23
PTN-201ENST00000348225 A0A075B6Q4 140 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 SLC22A20A6NK97 555 aa16.48■□□□□ 0.23
PTN-201ENST00000348225 OR4C45A6NMZ5 311 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms