RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 MED29Q9NX70 200 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 ALKBH4Q9NXW9 302 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 MRM2Q9UI43 246 aaKnown RBP8.25□□□□□ -1.09
ATG4A-202ENST00000345734 CMAHPQ9Y471 501 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 FKBP7Q9Y680 259 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 PHF3Q92576 2039 aaKnown RBP8.25□□□□□ -1.09
ATG4A-202ENST00000345734 IGLV1-36A0A0B4J1U3 117 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 A0A0G2JMM0 328 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 TRBV2A0A0J9YWF9 115 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 A0A1W2PPB8 328 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 A0A1W2PPK0 400 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 A0A1W2PRS3 328 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 ZNF891A8MT65 544 aaPredicted RBP8.24□□□□□ -1.09
ATG4A-202ENST00000345734 KIR3DP1A8MWS1 328 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 NPIPA5E9PKD4 350 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 TRIM3O75382 744 aaPredicted RBP8.24□□□□□ -1.09
ATG4A-202ENST00000345734 UPK1BO75841 260 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 SC5DO75845 299 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 RPP14O95059 124 aaKnown RBP8.24□□□□□ -1.09
ATG4A-202ENST00000345734 TNFSF15O95150 251 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 HLA-DQA2P01906 255 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 KLK2P20151 261 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 TGM1P22735 817 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 CAPZA2P47755 286 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 NANOS3P60323 173 aaKnown RBP8.24□□□□□ -1.09
ATG4A-202ENST00000345734 HSF1Q00613 529 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 POU3F1Q03052 451 aaPredicted RBP8.24□□□□□ -1.09
ATG4A-202ENST00000345734 HSF2Q03933 536 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 CHAF1BQ13112 559 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 TMEM176BQ3YBM2 270 aaPredicted RBP8.24□□□□□ -1.09
ATG4A-202ENST00000345734 ACSM3Q53FZ2 586 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 FAM205BPQ63HN1 556 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 C3orf33Q6P1S2 294 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 RPL22L1Q6P5R6 122 aaKnown RBP8.24□□□□□ -1.09
ATG4A-202ENST00000345734 TMEM81Q6P7N7 255 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 SLC35D2Q76EJ3 337 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 HSD17B8Q92506 261 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 NTNG2Q96CW9 530 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 MAP6Q96JE9 813 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 INTS14Q96SY0 518 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 AMELYQ99218 206 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 SDHCQ99643 169 aaPredicted RBP8.24□□□□□ -1.09
ATG4A-202ENST00000345734 ATF6BQ99941 703 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 MRPL22Q9NWU5 206 aaKnown RBP8.24□□□□□ -1.09
ATG4A-202ENST00000345734 B3GAT1Q9P2W7 334 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 KCNG2Q9UJ96 466 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 LAMP5Q9UJQ1 280 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 NPIPA1Q9UND3 350 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 PCDHGA1Q9Y5H4 931 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 RIF1Q5UIP0 2472 aaKnown RBP8.24□□□□□ -1.09
ATG4A-202ENST00000345734 KIAA1549Q9HCM3 1950 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 LOC101059948A0A1B0GTJ6 334 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 ZNF814B7Z6K7 855 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 H3BS24 57 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 ZNF593O00488 134 aaPredicted RBP8.24□□□□□ -1.09
ATG4A-202ENST00000345734 SNX4O95219 450 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 ABHD16AO95870 558 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 F10P00742 488 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 ICAM2P13598 275 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 LIFP15018 202 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 ALOX5APP20292 161 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 DPP4P27487 766 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 P2RY4P51582 365 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 MAP2K6P52564 334 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 OR2B6P58173 313 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 RPS11P62280 158 aaKnown RBP eCLIP8.24□□□□□ -1.09
ATG4A-202ENST00000345734 FMODQ06828 376 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 EIF3IQ13347 325 aaKnown RBP8.24□□□□□ -1.09
ATG4A-202ENST00000345734 MADCAM1Q13477 382 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 TRAM1Q15629 374 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 MEP1BQ16820 701 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 ZMAT1Q5H9K5 638 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 PXKQ7Z7A4 578 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 OR1J4Q8NGS1 313 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 THEM6Q8WUY1 208 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 ZBTB8AQ96BR9 441 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 MRPL48Q96GC5 212 aaKnown RBP8.24□□□□□ -1.09
ATG4A-202ENST00000345734 KLHL15Q96M94 604 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 EMC6Q9BV81 110 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 AP5S1Q9NUS5 200 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 COMMD3Q9UBI1 195 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 B3GALT5Q9Y2C3 310 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 COA3Q9Y2R0 106 aaPredicted RBP8.24□□□□□ -1.09
ATG4A-202ENST00000345734 V9GYH0 126 aa8.24□□□□□ -1.09
ATG4A-202ENST00000345734 IGKV1D-43A0A0B4J1Z2 117 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 A0A1B0GTH9 108 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 LOC110117498-PIK3R3F6TDL0 507 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 ZIC3O60481 467 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 RAD1O60671 282 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 RAMP1O60894 148 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 UPK3AO75631 287 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 MPZL1O95297 269 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 SERPINA7P05543 415 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 EIF1P41567 113 aaKnown RBP8.23□□□□□ -1.09
ATG4A-202ENST00000345734 MAGEB1P43366 347 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 DNASE1L1P49184 302 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 MTNR1BP49286 362 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 OR10A3P58181 314 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 SCRN3Q0VDG4 424 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 CSRP2Q16527 193 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms