RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 LSSP48449 732 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF385BQ569K4 471 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 BPIFB2Q8N4F0 458 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 OR2I1PQ8NGU4 316 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 NETO1Q8TDF5 533 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 SOSTQ9BQB4 213 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 POLDIP3Q9BY77 421 aaKnown RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 NRASP01111 189 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 HRASP01112 189 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 KRASP01116 189 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 CHRM4P08173 479 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 SLC6A9P48067 706 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 GANABQ14697 944 aaKnown RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 CNN3Q15417 329 aaKnown RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 FAM78BQ5VT40 261 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 PLEKHH3Q7Z736 793 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 OR5AU1Q8NGC0 362 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 SDR42E1Q8WUS8 393 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 SOX7Q9BT81 388 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 ST6GALNAC5Q9BVH7 336 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 NRIP3Q9NQ35 241 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 MRPS18AQ9NVS2 196 aaKnown RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 FZD1Q9UP38 647 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 A0A1W2PPH5 198 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 C7orf71A4D174 169 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 OR11H12B2RN74 326 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 OR12D1P0DN82 309 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 MPZP25189 248 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 PYCR1P32322 319 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 MBOAT1Q6ZNC8 495 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 DGAT2L6Q6ZPD8 337 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 OR11H1Q8NG94 326 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 OR11H2Q8NH07 326 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 ANKRD9Q96BM1 317 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 ZBP1Q9H171 429 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 TRAV36DV7A0A075B6V5 113 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 SYPP08247 313 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 ARL4DP49703 201 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 GSK3BP49841 420 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 IRF9Q00978 393 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 SHHQ15465 462 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF66Q6ZN08 573 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 TEX26Q8N6G2 289 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 FYTTD1Q96QD9 318 aaKnown RBP3.47□□□□□ -1.85
SYNE2-202ENST00000344113 MARCH2Q9P0N8 246 aa3.47□□□□□ -1.85
SYNE2-202ENST00000344113 OR2J2O76002 312 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 NFATC1O95644 943 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 CD3GP09693 182 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 CD37P11049 281 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 SPNP16150 400 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 NME2P22392 152 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 NPY1RP25929 384 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 PMS2P11Q13670 270 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 FSTL4Q6MZW2 842 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 SLC18B1Q6NT16 456 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 BOD1L2Q8IYS8 172 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 MESP1Q9BRJ9 268 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 NAA50Q9GZZ1 169 aaKnown RBP3.46□□□□□ -1.85
SYNE2-202ENST00000344113 PARP11Q9NR21 331 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 LPAR3Q9UBY5 353 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 LOC100289279A0A1B0GTE1 492 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 SEMG1P04279 462 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 CRYBA1P05813 215 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 DCTDP32321 178 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF92Q03936 586 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 RNFT1Q5M7Z0 435 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 CD200R1LQ6Q8B3 271 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 SDR9C7Q8NEX9 313 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 DTD2Q96FN9 168 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 WDR92Q96MX6 357 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 GATA5Q9BWX5 397 aaPredicted RBP3.46□□□□□ -1.85
SYNE2-202ENST00000344113 FAM117AQ9C073 453 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 DLL4Q9NR61 685 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 OR2M5A3KFT3 312 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 M0R296 226 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 CREG1O75629 220 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 EN2P19622 333 aaPredicted RBP3.46□□□□□ -1.85
SYNE2-202ENST00000344113 ISXQ2M1V0 245 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 C1orf194Q5T5A4 169 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM88Q6PEY1 159 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 FADS6Q8N9I5 356 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 FBXO22Q8NEZ5 403 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 MMP28Q9H239 520 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 SRMSQ9H3Y6 488 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 MAP1LC3AQ9H492 121 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 PPP1R3EQ9H7J1 279 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 FBXL2Q9UKC9 423 aa3.46□□□□□ -1.85
SYNE2-202ENST00000344113 SOCS2O14508 198 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 SUSD5O60279 629 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 LIPCP11150 499 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 AADACP22760 399 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 OR1D2P34982 312 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 PIGFQ07326 219 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 SGCGQ13326 291 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 IER5Q5VY09 327 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 DTWD1Q8N5C7 304 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 TMEM106CQ9BVX2 250 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 AMDHD2Q9Y303 409 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 OGG1O15527 345 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms