RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 CHN1P15882 459 aa8.75□□□□□ -1.01
ATXN3-201ENST00000340660 PGM1P36871 562 aa8.75□□□□□ -1.01
ATXN3-201ENST00000340660 IDH2P48735 452 aaKnown RBP8.75□□□□□ -1.01
ATXN3-201ENST00000340660 ANXA11P50995 505 aaKnown RBP8.75□□□□□ -1.01
ATXN3-201ENST00000340660 POLR2HP52434 150 aaKnown RBP8.75□□□□□ -1.01
ATXN3-201ENST00000340660 C2orf80Q0P641 193 aa8.75□□□□□ -1.01
ATXN3-201ENST00000340660 PSG7Q13046 419 aa8.75□□□□□ -1.01
ATXN3-201ENST00000340660 PMS2P11Q13670 270 aa8.75□□□□□ -1.01
ATXN3-201ENST00000340660 SELPLGQ14242 412 aa8.75□□□□□ -1.01
ATXN3-201ENST00000340660 ASPHD1Q5U4P2 390 aa8.75□□□□□ -1.01
ATXN3-201ENST00000340660 ZCCHC12Q6PEW1 402 aa8.75□□□□□ -1.01
ATXN3-201ENST00000340660 EGFL6Q8IUX8 553 aa8.75□□□□□ -1.01
ATXN3-201ENST00000340660 FGFRL1Q8N441 504 aa8.75□□□□□ -1.01
ATXN3-201ENST00000340660 OR5M8Q8NGP6 311 aa8.75□□□□□ -1.01
ATXN3-201ENST00000340660 OR1J2Q8NGS2 313 aa8.75□□□□□ -1.01
ATXN3-201ENST00000340660 STAG3L4Q8TBR4 150 aa8.75□□□□□ -1.01
ATXN3-201ENST00000340660 RNFT2Q96EX2 444 aa8.75□□□□□ -1.01
ATXN3-201ENST00000340660 CHMP6Q96FZ7 201 aa8.75□□□□□ -1.01
ATXN3-201ENST00000340660 UBXN10Q96LJ8 280 aa8.75□□□□□ -1.01
ATXN3-201ENST00000340660 C1orf198Q9H425 327 aa8.75□□□□□ -1.01
ATXN3-201ENST00000340660 PIGUQ9H490 435 aa8.75□□□□□ -1.01
ATXN3-201ENST00000340660 VPS29Q9UBQ0 182 aa8.75□□□□□ -1.01
ATXN3-201ENST00000340660 SURF4O15260 269 aa8.74□□□□□ -1.01
ATXN3-201ENST00000340660 INAFM2P0DMQ5 153 aa8.74□□□□□ -1.01
ATXN3-201ENST00000340660 ZNF43P17038 809 aa8.74□□□□□ -1.01
ATXN3-201ENST00000340660 CCNOP22674 350 aa8.74□□□□□ -1.01
ATXN3-201ENST00000340660 HTR3AP46098 478 aa8.74□□□□□ -1.01
ATXN3-201ENST00000340660 RAB13P51153 203 aa8.74□□□□□ -1.01
ATXN3-201ENST00000340660 DLG1Q12959 904 aa8.74□□□□□ -1.01
ATXN3-201ENST00000340660 ZNF141Q15928 474 aa8.74□□□□□ -1.01
ATXN3-201ENST00000340660 STX1AQ16623 288 aa8.74□□□□□ -1.01
ATXN3-201ENST00000340660 PFKFB4Q16877 469 aa8.74□□□□□ -1.01
ATXN3-201ENST00000340660 ZNF181Q2M3W8 571 aa8.74□□□□□ -1.01
ATXN3-201ENST00000340660 XKR7Q5GH72 579 aa8.74□□□□□ -1.01
ATXN3-201ENST00000340660 MOGAT3Q86VF5 341 aa8.74□□□□□ -1.01
ATXN3-201ENST00000340660 UBL4BQ8N7F7 174 aa8.74□□□□□ -1.01
ATXN3-201ENST00000340660 LY6G5BQ8NDX9 201 aa8.74□□□□□ -1.01
ATXN3-201ENST00000340660 CDC26Q8NHZ8 85 aa8.74□□□□□ -1.01
ATXN3-201ENST00000340660 SELENOMQ8WWX9 145 aa8.74□□□□□ -1.01
ATXN3-201ENST00000340660 APIPQ96GX9 242 aa8.74□□□□□ -1.01
ATXN3-201ENST00000340660 KCNJ15Q99712 375 aa8.74□□□□□ -1.01
ATXN3-201ENST00000340660 SH3GL3Q99963 347 aa8.74□□□□□ -1.01
ATXN3-201ENST00000340660 CXorf65A6NEN9 183 aa8.73□□□□□ -1.01
ATXN3-201ENST00000340660 NUPR2A6NF83 97 aa8.73□□□□□ -1.01
ATXN3-201ENST00000340660 AP3D1O14617 1153 aa8.73□□□□□ -1.01
ATXN3-201ENST00000340660 FNTAP49354 379 aa8.73□□□□□ -1.01
ATXN3-201ENST00000340660 CCNG1P51959 295 aa8.73□□□□□ -1.01
ATXN3-201ENST00000340660 LASP1Q14847 261 aaKnown RBP8.73□□□□□ -1.01
ATXN3-201ENST00000340660 FAM71E1Q6IPT2 247 aa8.73□□□□□ -1.01
ATXN3-201ENST00000340660 HCP5Q6MZN7 132 aa8.73□□□□□ -1.01
ATXN3-201ENST00000340660 COLCA1Q6ZS62 124 aa8.73□□□□□ -1.01
ATXN3-201ENST00000340660 EIF3MQ7L2H7 374 aaKnown RBP8.73□□□□□ -1.01
ATXN3-201ENST00000340660 OLIG3Q7RTU3 272 aa8.73□□□□□ -1.01
ATXN3-201ENST00000340660 SLC22A24Q8N4F4 322 aa8.73□□□□□ -1.01
ATXN3-201ENST00000340660 KLHL30-AS1Q8NEE0 82 aa8.73□□□□□ -1.01
ATXN3-201ENST00000340660 CLHC1Q8NHS4 586 aa8.73□□□□□ -1.01
ATXN3-201ENST00000340660 ATP6V1E2Q96A05 226 aa8.73□□□□□ -1.01
ATXN3-201ENST00000340660 LRMDAQ9H2I8 198 aa8.73□□□□□ -1.01
ATXN3-201ENST00000340660 PPP1R3EQ9H7J1 279 aa8.73□□□□□ -1.01
ATXN3-201ENST00000340660 MIEF1Q9NQG6 463 aa8.73□□□□□ -1.01
ATXN3-201ENST00000340660 LYVE1Q9Y5Y7 322 aa8.73□□□□□ -1.01
ATXN3-201ENST00000340660 ELOVL7A1L3X0 281 aa8.72□□□□□ -1.01
ATXN3-201ENST00000340660 A8MZ25 164 aa8.72□□□□□ -1.01
ATXN3-201ENST00000340660 CCL24O00175 119 aa8.72□□□□□ -1.01
ATXN3-201ENST00000340660 RNASET2O00584 256 aaKnown RBP8.72□□□□□ -1.01
ATXN3-201ENST00000340660 ADAM20O43506 726 aa8.72□□□□□ -1.01
ATXN3-201ENST00000340660 CRCPO75575 148 aa8.72□□□□□ -1.01
ATXN3-201ENST00000340660 UGT2B17O75795 530 aa8.72□□□□□ -1.01
ATXN3-201ENST00000340660 HMGN2P05204 90 aaKnown RBP8.72□□□□□ -1.01
ATXN3-201ENST00000340660 PNMTP11086 282 aa8.72□□□□□ -1.01
ATXN3-201ENST00000340660 GP9P14770 177 aa8.72□□□□□ -1.01
ATXN3-201ENST00000340660 SPNP16150 400 aa8.72□□□□□ -1.01
ATXN3-201ENST00000340660 PPP1CBP62140 327 aa8.72□□□□□ -1.01
ATXN3-201ENST00000340660 MAPK14Q16539 360 aa8.72□□□□□ -1.01
ATXN3-201ENST00000340660 SRSF7Q16629 238 aaKnown RBP eCLIP8.72□□□□□ -1.01
ATXN3-201ENST00000340660 SMU1Q2TAY7 513 aa8.72□□□□□ -1.01
ATXN3-201ENST00000340660 DCAKDQ8WVC6 231 aa8.72□□□□□ -1.01
ATXN3-201ENST00000340660 CIDECQ96AQ7 238 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-201ENST00000340660 MECRQ9BV79 373 aa8.72□□□□□ -1.01
ATXN3-201ENST00000340660 TAPBPLQ9BX59 468 aa8.72□□□□□ -1.01
ATXN3-201ENST00000340660 NMRK1Q9NWW6 199 aa8.72□□□□□ -1.01
ATXN3-201ENST00000340660 MTO1Q9Y2Z2 717 aaKnown RBP8.72□□□□□ -1.01
ATXN3-201ENST00000340660 FLG2Q5D862 2391 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-201ENST00000340660 LRRC30A6NM36 301 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 H3BSA7 217 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 DVL1O14640 695 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 FAM20BO75063 409 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 BRI3O95415 125 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 ECDO95905 644 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-201ENST00000340660 SLC6A1P30531 599 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 APLNRP35414 380 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 CEBPDP49716 269 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-201ENST00000340660 MAP2K6P52564 334 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 SLC12A2P55011 1212 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 MFGE8Q08431 387 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-201ENST00000340660 BNIP2Q12982 314 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 GPR68Q15743 365 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 GGTA1PQ4G0N0 100 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 FAM27D1Q5T7N8 215 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 TMEM53Q6P2H8 277 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms