RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 C1orf198Q9H425 327 aa13.25□□□□□ -0.29
VAPA-201ENST00000340541 CCNB1IP1Q9NPC3 277 aa13.25□□□□□ -0.29
VAPA-201ENST00000340541 IL20Q9NYY1 176 aa13.25□□□□□ -0.29
VAPA-201ENST00000340541 PMF1-BGLAPU3KQ54 211 aa13.25□□□□□ -0.29
VAPA-201ENST00000340541 ABCA1O95477 2261 aa13.25□□□□□ -0.29
VAPA-201ENST00000340541 LOC100509620A0A075B734 347 aa13.24□□□□□ -0.29
VAPA-201ENST00000340541 BHLHE40O14503 412 aa13.24□□□□□ -0.29
VAPA-201ENST00000340541 SSX4O60224 188 aa13.24□□□□□ -0.29
VAPA-201ENST00000340541 KHDRBS3O75525 346 aaKnown RBP13.24□□□□□ -0.29
VAPA-201ENST00000340541 BMP4P12644 408 aa13.24□□□□□ -0.29
VAPA-201ENST00000340541 HIST1H1CP16403 213 aaKnown RBP13.24□□□□□ -0.29
VAPA-201ENST00000340541 SNRPD2P62316 118 aaKnown RBP13.24□□□□□ -0.29
VAPA-201ENST00000340541 PLP2Q04941 152 aa13.24□□□□□ -0.29
VAPA-201ENST00000340541 RAB35Q15286 201 aa13.24□□□□□ -0.29
VAPA-201ENST00000340541 OTPQ5XKR4 325 aa13.24□□□□□ -0.29
VAPA-201ENST00000340541 RASSF6Q6ZTQ3 369 aa13.24□□□□□ -0.29
VAPA-201ENST00000340541 SPATA24Q86W54 205 aa13.24□□□□□ -0.29
VAPA-201ENST00000340541 SVOPLQ8N434 492 aa13.24□□□□□ -0.29
VAPA-201ENST00000340541 PAPD5Q8NDF8 572 aaKnown RBP13.24□□□□□ -0.29
VAPA-201ENST00000340541 OR4K13Q8NH42 304 aa13.24□□□□□ -0.29
VAPA-201ENST00000340541 AKR7LQ8NHP1 331 aa13.24□□□□□ -0.29
VAPA-201ENST00000340541 MRPL24Q96A35 216 aaKnown RBP13.24□□□□□ -0.29
VAPA-201ENST00000340541 SLCO4A1Q96BD0 722 aa13.24□□□□□ -0.29
VAPA-201ENST00000340541 POM121L2Q96KW2 1035 aa13.24□□□□□ -0.29
VAPA-201ENST00000340541 TSSK2Q96PF2 358 aa13.24□□□□□ -0.29
VAPA-201ENST00000340541 SORCS2Q96PQ0 1159 aa13.24□□□□□ -0.29
VAPA-201ENST00000340541 SNX18Q96RF0 628 aa13.24□□□□□ -0.29
VAPA-201ENST00000340541 NMNAT3Q96T66 252 aa13.24□□□□□ -0.29
VAPA-201ENST00000340541 DGCR6LQ9BY27 220 aa13.24□□□□□ -0.29
VAPA-201ENST00000340541 MRPL37Q9BZE1 423 aaKnown RBP13.24□□□□□ -0.29
VAPA-201ENST00000340541 COA3Q9Y2R0 106 aaPredicted RBP13.24□□□□□ -0.29
VAPA-201ENST00000340541 SPEF1Q9Y4P9 236 aa13.24□□□□□ -0.29
VAPA-201ENST00000340541 CR1P17927 2039 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 SONP18583 2426 aaKnown RBP13.23□□□□□ -0.29
VAPA-201ENST00000340541 MXRA5Q9NR99 2828 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 IGLV1-36A0A0B4J1U3 117 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 IQCMA0A1B0GVH7 501 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 IDH3BO43837 385 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 LY6HO94772 140 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 MPZL1O95297 269 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 CST1P01037 141 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 PTHP01270 115 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 FAM157BP0CG42 384 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 GAAP10253 952 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 HOXB6P17509 224 aaKnown RBP13.23□□□□□ -0.29
VAPA-201ENST00000340541 STOMP27105 288 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 PPOXP50336 477 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 EFNA4P52798 201 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 NUDT6P53370 316 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 GALK2Q01415 458 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 HSF2Q03933 536 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 GK3PQ14409 553 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 KCNMB1Q16558 191 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 TBC1D28Q2M2D7 210 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 CLEC12AQ5QGZ9 265 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 ZNF362Q5T0B9 420 aaPredicted RBP13.23□□□□□ -0.29
VAPA-201ENST00000340541 RPL13AP3Q6NVV1 102 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 LEG1Q6P5S2 330 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 SYT9Q86SS6 491 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 LRP11Q86VZ4 500 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 GLB1L2Q8IW92 636 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 OR6V1Q8N148 313 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 MAPK1IP1LQ8NDC0 245 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 OR10H5Q8NGA6 315 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 OR10G2Q8NGC3 310 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 OR1J2Q8NGS2 313 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 DDOQ99489 341 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 CDH20Q9HBT6 801 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 B9D1Q9UPM9 204 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 CMAHPQ9Y471 501 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 TIMM10BQ9Y5J6 103 aa13.23□□□□□ -0.29
VAPA-201ENST00000340541 OR6C68A6NDL8 312 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 ARRDC5A6NEK1 342 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 C12orf71A8MTZ7 269 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 VSTM5A8MXK1 200 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 FKBP6O75344 327 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 ATP5HO75947 161 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 GPANK1O95872 356 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 F12P00748 615 aaPredicted RBP13.22□□□□□ -0.29
VAPA-201ENST00000340541 APLNRP35414 380 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 WNT5AP41221 380 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 GUCA1AP43080 201 aaPredicted RBP13.22□□□□□ -0.29
VAPA-201ENST00000340541 EVX1P49640 407 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 ERFP50548 548 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 PCBD1P61457 104 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 ERVS71-1P61550 626 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 ZNF774Q6NX45 483 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 CD300LDQ6UXZ3 194 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 ZNF525Q8N782 197 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 NPEPL1Q8NDH3 523 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 C11orf40Q8WZ69 217 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 FEVQ99581 238 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 NIPSNAP1Q9BPW8 284 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 WACQ9BTA9 647 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 LRMDAQ9H2I8 198 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 RERGLQ9H628 205 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 YAE1D1Q9NRH1 226 aa13.22□□□□□ -0.29
VAPA-201ENST00000340541 MYEF2Q9P2K5 600 aaKnown RBP13.22□□□□□ -0.29
VAPA-201ENST00000340541 IGHV4-30-2A0A087WSY4 118 aa13.21□□□□□ -0.29
VAPA-201ENST00000340541 A8MV72 311 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms