RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 SLC16A6O15403 523 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 PRODHO43272 600 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 PRKYO43930 277 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 MPZL2O60487 215 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 CTAG2O75638 210 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 ATP6V1G2O95670 118 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 IGKV3-15P01624 115 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 IGLV1-44P01699 117 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 CRYAAP02489 173 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 TFP02787 698 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 GYPBP06028 91 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 MMP7P09237 267 aaPredicted RBP10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 ZNF32P17041 273 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 GSTT1P30711 240 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 IDH3GP51553 393 aaPredicted RBP10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 EFNB1P98172 346 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 ENDOGQ14249 297 aaKnown RBP10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 RAB39AQ14964 217 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 UGT2A3Q6UWM9 527 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 DHRSXQ8N5I4 330 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 GJC3Q8NFK1 279 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 FAM81AQ8TBF8 368 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 MBOAT4Q96T53 435 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 TEAD3Q99594 435 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 APOL4Q9BPW4 351 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 ZNF224Q9NZL3 707 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 NPAP1Q9NZP6 1156 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 NDRG4Q9ULP0 352 aaKnown RBP10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 RNF115Q9Y4L5 304 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 ICE1Q9Y2F5 2266 aa10.37□□□□□ -0.75
SPTLC1-202ENST00000337841 HCFC1P51610 2035 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 DOPEY2Q9Y3R5 2298 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 CACNA1CQ13936 2221 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 IGHV1-18A0A0C4DH31 117 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 ZNF503-AS2A6NEH8 195 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 TVP23AA6NH52 213 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 VSTM5A8MXK1 200 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 ZNF593O00488 134 aaPredicted RBP10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 GPANK1O95872 356 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 GAAP10253 952 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 CLUP10909 449 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 APLNRP35414 380 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 ADAM8P78325 824 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 PSG4Q00888 419 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 BSPH1Q075Z2 132 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 AQP6Q13520 282 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 APOFQ13790 326 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 PABPC1L2AQ5JQF8 200 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 LCN1P1Q5VSP4 162 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 NXNL2Q5VZ03 156 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 SLC22A25Q6T423 547 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 SEZ6L2Q6UXD5 910 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 MEPCEQ7L2J0 689 aaKnown RBP10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 SHFQ7M4L6 423 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 TMEM200AQ86VY9 491 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 GID4Q8IVV7 300 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 ZNF511Q8NB15 262 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 ZNRF4Q8WWF5 429 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 RFKQ969G6 155 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 HCAR1Q9BXC0 346 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 OR2H1Q9GZK4 316 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 CLEC4MQ9H2X3 399 aaPredicted RBP10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 ASH2LQ9UBL3 628 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 SPEF1Q9Y4P9 236 aa10.36□□□□□ -0.75
SPTLC1-202ENST00000337841 SLC22A31A6NKX4 558 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 SNTNA6NMZ2 147 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 E9PQ18 207 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 H0YJX3 145 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 ABCD4O14678 606 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 SIAH2O43255 324 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 SGCEO43556 437 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 CECR9P0C854 216 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 COX5BP10606 129 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 ZNF14P17017 642 aaPredicted RBP10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 ENTPD1P49961 510 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 GDI2P50395 445 aaKnown RBP10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 SNRPGP62308 76 aaKnown RBP10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 NAAAQ02083 359 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 DBPQ10586 325 aaPredicted RBP10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 TMED1Q13445 227 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 KEAP1Q14145 624 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 MEP1BQ16820 701 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 TBC1D28Q2M2D7 210 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 TEX30Q5JUR7 227 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 SLC25A30Q5SVS4 291 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 LINC01590Q5TEZ4 76 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 AADACL4Q5VUY2 407 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 MEDAGQ5VYS4 303 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 SLC30A7Q8NEW0 376 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 OR4F15Q8NGB8 312 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 AKR7LQ8NHP1 331 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 CYGBQ8WWM9 190 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 ZMYND19Q96E35 227 aaPredicted RBP10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 Q96MT0 163 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 ZNF75AQ96N20 296 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 INTS14Q96SY0 518 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 PITX2Q99697 317 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 TMEM204Q9BSN7 226 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 CDH20Q9HBT6 801 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 NOX3Q9HBY0 568 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms