RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 TSPAN19P0C672 248 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 LAP3P28838 519 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 RPL4P36578 427 aaKnown RBP9.08□□□□□ -0.96
CAPN3-202ENST00000337571 YAP1P46937 504 aaKnown RBP9.08□□□□□ -0.96
CAPN3-202ENST00000337571 FMODQ06828 376 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 TRAM2Q15035 370 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 ZMAT1Q5H9K5 638 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 SPATA46Q5T0L3 261 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 SLC25A47Q6Q0C1 308 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 FKBP9P1Q75LS8 142 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 ZER1Q7Z7L7 766 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 MICU2Q8IYU8 434 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 RNF113BQ8IZP6 322 aaKnown RBP9.08□□□□□ -0.96
CAPN3-202ENST00000337571 OR4M2Q8NGB6 313 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 ABHD4Q8TB40 342 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 SLC25A40Q8TBP6 338 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 KLF14Q8TD94 323 aaPredicted RBP9.08□□□□□ -0.96
CAPN3-202ENST00000337571 NABP1Q96AH0 204 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 MARS2Q96GW9 593 aaKnown RBP9.08□□□□□ -0.96
CAPN3-202ENST00000337571 POM121L2Q96KW2 1035 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 JMJD8Q96S16 334 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 DIRC2Q96SL1 478 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 OR2H1Q9GZK4 316 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 OR2J1Q9GZK6 312 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 NDEL1Q9GZM8 345 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 FGFR1OP2Q9NVK5 253 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 RHCGQ9UBD6 479 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 GRHPRQ9UBQ7 328 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 CGGBP1Q9UFW8 167 aaPredicted RBP9.08□□□□□ -0.96
CAPN3-202ENST00000337571 PCDHB10Q9UN67 800 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 LOC100509620A0A075B734 347 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 ISPDA4D126 451 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 FXYD1O00168 92 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 XKRYO14609 159 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 PLPP2O43688 288 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 PIP5K1CO60331 668 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 MSR1P21757 451 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 TNFSF4P23510 183 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 SLC9A3P48764 834 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 PPP1CBP62140 327 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 PRKCDQ05655 676 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 DCAF12L2Q5VW00 463 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 MBNL2Q5VZF2 373 aaKnown RBP9.07□□□□□ -0.96
CAPN3-202ENST00000337571 ZNF730Q6ZMV8 503 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 ARPINQ7Z6K5 226 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 SYT9Q86SS6 491 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 IGFN1Q86VF2 1251 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 CYP4Z1Q86W10 505 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 MEX3DQ86XN8 651 aaKnown RBP9.07□□□□□ -0.96
CAPN3-202ENST00000337571 NRMQ8IXM6 262 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 ZNF101Q8IZC7 436 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 NANPQ8TBE9 248 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 ST7LQ8TDW4 575 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 ZFAND2BQ8WV99 257 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 C4orf45Q96LM5 186 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 GAL3ST1Q99999 423 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 WACQ9BTA9 647 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 NDRG4Q9ULP0 352 aaKnown RBP9.07□□□□□ -0.96
CAPN3-202ENST00000337571 A4GNTQ9UNA3 340 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 WIPI2Q9Y4P8 454 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 CAPN7Q9Y6W3 813 aa9.07□□□□□ -0.96
CAPN3-202ENST00000337571 TRAV27A0A087WT01 109 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 IGKV1D-43A0A0B4J1Z2 117 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 H3BSA7 217 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 TRIM77I1YAP6 450 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 J3QLI3 93 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 SLC22A2O15244 555 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 AHCYL1O43865 530 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 TIMM8AO60220 97 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-202ENST00000337571 VENTXO95231 258 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 IGHV1-46P01743 117 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 IGHMP01871 453 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 MAKP20794 623 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 GSTM3P21266 225 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 TUBG1P23258 451 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 GATA3P23771 443 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 WNT5AP41221 380 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 MMP15P51511 669 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 IFI44LQ53G44 452 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 ZNF774Q6NX45 483 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 CLDN22Q8N7P3 220 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-202ENST00000337571 RP9Q8TA86 221 aaKnown RBP9.06□□□□□ -0.96
CAPN3-202ENST00000337571 IPCEF1Q8WWN9 437 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-202ENST00000337571 GEMIN6Q8WXD5 167 aaKnown RBP9.06□□□□□ -0.96
CAPN3-202ENST00000337571 ACOT11Q8WXI4 607 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-202ENST00000337571 GCDHQ92947 438 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-202ENST00000337571 RCN3Q96D15 328 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 NMD3Q96D46 503 aaKnown RBP9.06□□□□□ -0.96
CAPN3-202ENST00000337571 HOPXQ9BPY8 73 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-202ENST00000337571 C7orf69Q9H7B7 122 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 TUBG2Q9NRH3 451 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 UBAP1Q9NZ09 502 aa9.06□□□□□ -0.96
CAPN3-202ENST00000337571 FAM32AQ9Y421 112 aaKnown RBP9.06□□□□□ -0.96
CAPN3-202ENST00000337571 LOC105371242A0A075B767 164 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 CXCR6O00574 342 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 NDUFAB1O14561 156 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 CCDC22O60826 627 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 GMNNO75496 209 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 RGS9O75916 674 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms