RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 MMP25Q9NPA2 562 aa14.95□□□□□ -0.02
CDC42EP4-201ENST00000335793 DOCK8Q8NF50 2099 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 PPT1P50897 306 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 PDZK1IP1Q13113 114 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 AVPI1Q5T686 147 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 LINC00114Q6XXX2 140 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 TMEM184AQ6ZMB5 413 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 TTLL10Q6ZVT0 673 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 NAA40Q86UY6 237 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 ZNF321PQ8N8H1 164 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 WDSUB1Q8N9V3 476 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 FAM71CQ8NEG0 241 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 OR51M1Q9H341 326 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 SLC16A7O60669 478 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 NDUFB6O95139 128 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 NR2C1P13056 603 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 IL12BP29460 328 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 PCP4P48539 62 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 ARL4DP49703 201 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 YPEL5P62699 121 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 RBM39Q14498 530 aaKnown RBP14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 ATXN7L3Q14CW9 347 aaPredicted RBP14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 BEX5Q5H9J7 111 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 KDM8Q8N371 416 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 RLN3Q8WXF3 142 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 STEAP1Q9UHE8 339 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 MKL2Q9ULH7 1088 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 MOKQ9UQ07 419 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 PCDHGA1Q9Y5H4 931 aa14.94□□□□□ -0.02
CDC42EP4-201ENST00000335793 IGKV1D-42A0A075B6H8 117 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 CD3DP04234 171 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 GIPP09681 153 aaPredicted RBP14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 STARP49675 285 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 SORDQ00796 357 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 SSX2Q16385 188 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 MNTQ99583 582 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 UFSP2Q9NUQ7 469 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 CKLFQ9UBR5 152 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 GPN3Q9UHW5 284 aaPredicted RBP14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 TMEM14AQ9Y6G1 99 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 SPEGQ15772 3267 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 TNRC18O15417 2968 aaPredicted RBP14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 REV3LO60673 3130 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 F5H5P2 479 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 UPK3AO75631 287 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 GLSO94925 669 aaPredicted RBP14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 UTS2O95399 124 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 S100A11P31949 105 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 GPR3P46089 330 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 RABIFP47224 123 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 P2RY4P51582 365 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 HSD17B7P56937 341 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 SEC61A1P61619 476 aaKnown RBP14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 UBE2IP63279 158 aaKnown RBP14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 FABP9Q0Z7S8 132 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 ZNF440Q8IYI8 595 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 SLC22A18ASQ8N1D0 253 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 EID2Q8N6I1 236 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 CMKLR1Q99788 373 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 MRI1Q9BV20 369 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 TBL1XR1Q9BZK7 514 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 WRBO00258 174 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 FOXS1O43638 330 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 RAB11BQ15907 218 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 GSG1LQ6UXU4 331 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 TMUB2Q71RG4 321 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 AKR7LQ8NHP1 331 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 STK35Q8TDR2 534 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 CMTM3Q96MX0 182 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 AMELYQ99218 206 aa14.93□□□□□ -0.02
CDC42EP4-201ENST00000335793 MCRIP1C9JLW8 97 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 IGHV2-70P01814 119 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 CD2P06729 351 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 IL10RAQ13651 578 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 C2orf76Q3KRA6 126 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 MESTQ5EB52 335 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 ELFN2Q5R3F8 820 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 EXOSC6Q5RKV6 272 aaKnown RBP14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 ZNF626Q68DY1 528 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 TAAR8Q969N4 342 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 FAM3DQ96BQ1 224 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 TSPAN32Q96QS1 320 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 NMNAT2Q9BZQ4 307 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 UNKLQ9H9P5 680 aaKnown RBP14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 NPDC1Q9NQX5 325 aaPredicted RBP14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 DHDHQ9UQ10 334 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 HIF3AQ9Y2N7 669 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 YBX2Q9Y2T7 364 aaKnown RBP14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 ETV7Q9Y603 341 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 GGT3PA6NGU5 568 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 TMEM150CB9EJG8 249 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 M0QYG6 137 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 CDC40O60508 579 aaKnown RBP eCLIP14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 HOXC4P09017 264 aaPredicted RBP14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 NR0B1P51843 470 aaKnown RBP14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 ADAM8P78325 824 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 OR10K2Q6IF99 312 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 PXT1Q8NFP0 134 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 KLHDC3Q9BQ90 382 aa14.92□□□□□ -0.02
CDC42EP4-201ENST00000335793 FBRSQ9HAH7 460 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms