RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 TRPM6Q9BX84 2022 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 LOC107986453A0A1B0GWG9 222 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 FBLP22087 321 aaKnown RBP12.8□□□□□ -0.36
EPHB3-201ENST00000330394 HNRNPA2B1P22626 353 aaKnown RBP12.8□□□□□ -0.36
EPHB3-201ENST00000330394 TAGLN2P37802 199 aaKnown RBP12.8□□□□□ -0.36
EPHB3-201ENST00000330394 AKR1E2Q96JD6 320 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 MCOLN1Q9GZU1 580 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 PCDHGA1Q9Y5H4 931 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 PTPRZ1P23471 2315 aaPredicted RBP12.8□□□□□ -0.36
EPHB3-201ENST00000330394 XRCC3O43542 346 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 DBHP09172 617 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 SDHAP31040 664 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 SLC6A8P48029 635 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 DHPSP49366 369 aaPredicted RBP12.8□□□□□ -0.36
EPHB3-201ENST00000330394 EMDP50402 254 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 MRPS34P82930 218 aaKnown RBP12.8□□□□□ -0.36
EPHB3-201ENST00000330394 MANEAQ5SRI9 462 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 TSTD1Q8NFU3 115 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 ZNF296Q8WUU4 475 aaPredicted RBP12.8□□□□□ -0.36
EPHB3-201ENST00000330394 RRNAD1Q96FB5 475 aaKnown RBP12.8□□□□□ -0.36
EPHB3-201ENST00000330394 NELFAQ9H3P2 528 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 GPANK1O95872 356 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 IL5P05113 134 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 UBXN2BQ14CS0 331 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 C4orf17Q53FE4 359 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 HIST2H3AQ71DI3 136 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 LSRQ86X29 649 aaPredicted RBP12.8□□□□□ -0.36
EPHB3-201ENST00000330394 CCL4L1Q8NHW4 92 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 FAM174AQ8TBP5 190 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 PTP4A1Q93096 173 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 DEFB126Q9BYW3 111 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 ADGRL4Q9HBW9 690 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 ENTPD2Q9Y5L3 495 aa12.8□□□□□ -0.36
EPHB3-201ENST00000330394 UBR3Q6ZT12 1888 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 ZNF98A6NK75 572 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 OR6C76A6NM76 312 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 BCL2L11O43521 198 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 GNB3P16520 340 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 ZNF136P52737 540 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 PCBP4P57723 403 aaKnown RBP12.79□□□□□ -0.36
EPHB3-201ENST00000330394 RUNX2Q13950 521 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 C11orf87Q6NUJ2 197 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 Q6ZNB5 142 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 GALNT16Q8N428 558 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 SLC22A24Q8N4F4 322 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 MRPL43Q8N983 215 aaKnown RBP12.79□□□□□ -0.36
EPHB3-201ENST00000330394 BORCS8Q96FH0 119 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 GPR137Q96N19 417 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 EXOSC3Q9NQT5 275 aaKnown RBP12.79□□□□□ -0.36
EPHB3-201ENST00000330394 SLCO1C1Q9NYB5 712 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 FOXJ3Q9UPW0 622 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 HCFC2Q9Y5Z7 792 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 SMCO3A2RU48 225 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 NAGAP17050 411 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 RPL18Q07020 188 aaKnown RBP12.79□□□□□ -0.36
EPHB3-201ENST00000330394 EIF4EBP2Q13542 120 aaPredicted RBP12.79□□□□□ -0.36
EPHB3-201ENST00000330394 ADAMTSL4Q6UY14 1074 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 FAM219AQ8IW50 185 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 FAM3CQ92520 227 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 RHOFQ9HBH0 211 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 RAB22AQ9UL26 194 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 SLC22A7Q9Y694 548 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 MIA3Q5JRA6 1907 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 UNC13CQ8NB66 2214 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 MED19A0JLT2 244 aaPredicted RBP12.79□□□□□ -0.36
EPHB3-201ENST00000330394 POM121BA6NF01 834 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 UMAD1C9J7I0 102 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 F12P00748 615 aaPredicted RBP12.79□□□□□ -0.36
EPHB3-201ENST00000330394 ANKRD34CP0C6C1 535 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 CCR2P41597 374 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 RAB13P51153 203 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 AGFG1P52594 562 aaKnown RBP12.79□□□□□ -0.36
EPHB3-201ENST00000330394 DHRS2Q13268 280 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 OGFOD3Q6PK18 319 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 BATF2Q8N1L9 274 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 ARHGDIGQ99819 225 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 TPSD1Q9BZJ3 242 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 DOCK3Q8IZD9 2030 aa12.79□□□□□ -0.36
EPHB3-201ENST00000330394 A0A0A6YYD5 115 aa12.78□□□□□ -0.36
EPHB3-201ENST00000330394 A0A0B4J293 547 aa12.78□□□□□ -0.36
EPHB3-201ENST00000330394 C7orf66A4D0T2 115 aa12.78□□□□□ -0.36
EPHB3-201ENST00000330394 GLSO94925 669 aaPredicted RBP12.78□□□□□ -0.36
EPHB3-201ENST00000330394 GJA4P35212 333 aa12.78□□□□□ -0.36
EPHB3-201ENST00000330394 ZNF626Q68DY1 528 aa12.78□□□□□ -0.36
EPHB3-201ENST00000330394 TANGO2Q6ICL3 276 aa12.78□□□□□ -0.36
EPHB3-201ENST00000330394 CD300LDQ6UXZ3 194 aa12.78□□□□□ -0.36
EPHB3-201ENST00000330394 FAM160A2Q8N612 972 aaPredicted RBP12.78□□□□□ -0.36
EPHB3-201ENST00000330394 RCBTB1Q8NDN9 531 aa12.78□□□□□ -0.36
EPHB3-201ENST00000330394 OR51Q1Q8NH59 317 aa12.78□□□□□ -0.36
EPHB3-201ENST00000330394 OR1S1Q8NH92 325 aa12.78□□□□□ -0.36
EPHB3-201ENST00000330394 OPN4Q9UHM6 478 aa12.78□□□□□ -0.36
EPHB3-201ENST00000330394 EP400Q96L91 3159 aa12.78□□□□□ -0.36
EPHB3-201ENST00000330394 A6NIZ1 184 aa12.78□□□□□ -0.36
EPHB3-201ENST00000330394 LRP3O75074 770 aa12.78□□□□□ -0.36
EPHB3-201ENST00000330394 OR7C1O76099 320 aaPredicted RBP12.78□□□□□ -0.36
EPHB3-201ENST00000330394 SLC35E2P0CK97 266 aa12.78□□□□□ -0.36
EPHB3-201ENST00000330394 FCGR2AP12318 317 aa12.78□□□□□ -0.36
EPHB3-201ENST00000330394 DAP3P51398 398 aaKnown RBP12.78□□□□□ -0.36
EPHB3-201ENST00000330394 RAP1BP61224 184 aa12.78□□□□□ -0.36
EPHB3-201ENST00000330394 RAP1AP62834 184 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms