RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 OR6N2Q8NGY6 317 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 RPS4Y2Q8TD47 263 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 SF3B5Q9BWJ5 86 aaKnown RBP16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 TTTY10Q9BZA0 68 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 PRRG4Q9BZD6 226 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 CLCF1Q9UBD9 225 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 LAMP5Q9UJQ1 280 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 ING1Q9UK53 422 aaPredicted RBP16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 GTF3C1Q12789 2109 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 CD8B2A6NJW9 211 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 SLC22A20A6NK97 555 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 CD8BP10966 210 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 CTLA4P16410 223 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 MXD1Q05195 221 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 RASGEF1BQ0VAM2 473 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 ZNF585AQ6P3V2 769 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 HDDC2Q7Z4H3 204 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 ZIC4Q8N9L1 334 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 ABHD4Q8TB40 342 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 GHSRQ92847 366 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 ZNF775Q96BV0 537 aaPredicted RBP16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 ZNF385AQ96PM9 386 aaKnown RBP16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 KCNS3Q9BQ31 491 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 EMC6Q9BV81 110 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 TPK1Q9H3S4 243 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 SMURF1Q9HCE7 757 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 ACOXLQ9NUZ1 547 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 GRIP1Q9Y3R0 1128 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 ZNF175Q9Y473 711 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 CASKO14936 926 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 MAGEB4O15481 346 aaPredicted RBP16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 GPRIN2O60269 458 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 TPOP07202 933 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 MTNR1BP49286 362 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 PPP5CP53041 499 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 BIDP55957 195 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 GLO1Q04760 184 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 HNRNPA0Q13151 305 aaKnown RBP16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 ACSF3Q4G176 576 aaPredicted RBP16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 PAMR1Q6UXH9 720 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 GFRALQ6UXV0 394 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 FAM220AQ7Z4H9 259 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 OTOSQ8NHW6 89 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 AP3S1Q92572 193 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 TRIB1Q96RU8 372 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 FLVCR1Q9Y5Y0 555 aa16.61■□□□□ 0.25
EXOSC3-201ENST00000327304 HLA-DQA2P01906 255 aa16.6■□□□□ 0.25
EXOSC3-201ENST00000327304 KRT8P05787 483 aa16.6■□□□□ 0.25
EXOSC3-201ENST00000327304 CLEC2LP0C7M8 214 aa16.6■□□□□ 0.25
EXOSC3-201ENST00000327304 GDI2P50395 445 aaKnown RBP16.6■□□□□ 0.25
EXOSC3-201ENST00000327304 CLDN17P56750 224 aa16.6■□□□□ 0.25
EXOSC3-201ENST00000327304 DPY19L4Q7Z388 723 aa16.6■□□□□ 0.25
EXOSC3-201ENST00000327304 CD163Q86VB7 1156 aa16.6■□□□□ 0.25
EXOSC3-201ENST00000327304 FAM57AQ8TBR7 257 aa16.6■□□□□ 0.25
EXOSC3-201ENST00000327304 ASB17Q8WXJ9 295 aa16.6■□□□□ 0.25
EXOSC3-201ENST00000327304 PLEKHB1Q9UF11 243 aaPredicted RBP16.6■□□□□ 0.25
EXOSC3-201ENST00000327304 CLEC4AQ9UMR7 237 aa16.6■□□□□ 0.25
EXOSC3-201ENST00000327304 KLHDC2Q9Y2U9 406 aa16.6■□□□□ 0.25
EXOSC3-201ENST00000327304 TRBV2A0A0J9YWF9 115 aa16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 AHRRA9YTQ3 701 aa16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 PRR32B1ATL7 298 aa16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 ABOP16442 354 aa16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 CFL1P23528 166 aaKnown RBP16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 EDNRAP25101 427 aa16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 INSL4Q14641 139 aa16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 WDFY2Q96P53 400 aa16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 SH3GL3Q99963 347 aa16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 MRPL22Q9NWU5 206 aaKnown RBP16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 MRM2Q9UI43 246 aaKnown RBP16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 KALRNO60229 2985 aa16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 IGKV3D-15A0A087WSY6 115 aa16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 SLC35F4A4IF30 521 aa16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 ZNF593O00488 134 aaPredicted RBP16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 CTDSP2O14595 271 aa16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 KHDRBS3O75525 346 aaKnown RBP16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 ABHD16AO95870 558 aa16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 NTF4P34130 210 aa16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 ETFDHQ16134 617 aa16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 ACSM3Q53FZ2 586 aa16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 BTLAQ7Z6A9 289 aa16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 CCDC190Q86UF4 302 aa16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 CPT1CQ8TCG5 803 aa16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 PHYHIPQ92561 330 aa16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 MRPL13Q9BYD1 178 aaKnown RBP16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 KLHL9Q9P2J3 617 aa16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 COA3Q9Y2R0 106 aaPredicted RBP16.59■□□□□ 0.25
EXOSC3-201ENST00000327304 RP1L1Q8IWN7 2480 aaPredicted RBP16.58■□□□□ 0.25
EXOSC3-201ENST00000327304 ZFYVE26Q68DK2 2539 aa16.58■□□□□ 0.24
EXOSC3-201ENST00000327304 UPK3AO75631 287 aa16.58■□□□□ 0.24
EXOSC3-201ENST00000327304 GATBO75879 557 aaKnown RBP16.58■□□□□ 0.24
EXOSC3-201ENST00000327304 GPANK1O95872 356 aa16.58■□□□□ 0.24
EXOSC3-201ENST00000327304 EDN3P14138 238 aa16.58■□□□□ 0.24
EXOSC3-201ENST00000327304 CAMK2DQ13557 499 aa16.58■□□□□ 0.24
EXOSC3-201ENST00000327304 LIPNQ5VXI9 398 aa16.58■□□□□ 0.24
EXOSC3-201ENST00000327304 CARD17Q5XLA6 110 aa16.58■□□□□ 0.24
EXOSC3-201ENST00000327304 P4HA3Q7Z4N8 544 aa16.58■□□□□ 0.24
EXOSC3-201ENST00000327304 CEACAM19Q7Z692 300 aa16.58■□□□□ 0.24
EXOSC3-201ENST00000327304 TPRA1Q86W33 373 aa16.58■□□□□ 0.24
EXOSC3-201ENST00000327304 ZNF454Q8N9F8 522 aa16.58■□□□□ 0.24
EXOSC3-201ENST00000327304 OR6X1Q8NH79 312 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms