RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 FAM107BQ9H098 131 aa15.17■□□□□ 0.02
TPM1-203ENST00000317516 WNT5BQ9H1J7 359 aa15.17■□□□□ 0.02
TPM1-203ENST00000317516 CYSLTR2Q9NS75 346 aa15.17■□□□□ 0.02
TPM1-203ENST00000317516 EGFL7Q9UHF1 273 aa15.17■□□□□ 0.02
TPM1-203ENST00000317516 NDRG4Q9ULP0 352 aaKnown RBP15.17■□□□□ 0.02
TPM1-203ENST00000317516 CDC42EP2O14613 210 aa15.16■□□□□ 0.02
TPM1-203ENST00000317516 NCR1O76036 304 aa15.16■□□□□ 0.02
TPM1-203ENST00000317516 NDUFB2O95178 105 aa15.16■□□□□ 0.02
TPM1-203ENST00000317516 ANPEPP15144 967 aa15.16■□□□□ 0.02
TPM1-203ENST00000317516 ITGA2P17301 1181 aa15.16■□□□□ 0.02
TPM1-203ENST00000317516 SRP14P37108 136 aaKnown RBP15.16■□□□□ 0.02
TPM1-203ENST00000317516 CRYBB2P43320 205 aa15.16■□□□□ 0.02
TPM1-203ENST00000317516 ZNF81P51508 661 aa15.16■□□□□ 0.02
TPM1-203ENST00000317516 SMIM11AP58511 58 aa15.16■□□□□ 0.02
TPM1-203ENST00000317516 FGD3Q5JSP0 725 aa15.16■□□□□ 0.02
TPM1-203ENST00000317516 MBNL2Q5VZF2 373 aaKnown RBP15.16■□□□□ 0.02
TPM1-203ENST00000317516 GPR139Q6DWJ6 353 aa15.16■□□□□ 0.02
TPM1-203ENST00000317516 GLCCI1Q86VQ1 547 aa15.16■□□□□ 0.02
TPM1-203ENST00000317516 CLDND2Q8NHS1 167 aa15.16■□□□□ 0.02
TPM1-203ENST00000317516 MARS2Q96GW9 593 aaKnown RBP15.16■□□□□ 0.02
TPM1-203ENST00000317516 Q96M85 177 aa15.16■□□□□ 0.02
TPM1-203ENST00000317516 ZNF570Q96NI8 536 aa15.16■□□□□ 0.02
TPM1-203ENST00000317516 RACGAP1Q9H0H5 632 aa15.16■□□□□ 0.02
TPM1-203ENST00000317516 POLE4Q9NR33 117 aa15.16■□□□□ 0.02
TPM1-203ENST00000317516 DCAF13Q9NV06 445 aaKnown RBP15.16■□□□□ 0.02
TPM1-203ENST00000317516 NDUFAF4Q9P032 175 aa15.16■□□□□ 0.02
TPM1-203ENST00000317516 AURKCQ9UQB9 309 aa15.16■□□□□ 0.02
TPM1-203ENST00000317516 YLPM1P49750 1951 aaKnown RBP15.16■□□□□ 0.02
TPM1-203ENST00000317516 IGHV1-69-2A0A0G2JMI3 117 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 PRSS37A4D1T9 235 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 H3BSA7 217 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 SNX3O60493 162 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 CDC14BO60729 498 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 RP2O75695 350 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 COX5BP10606 129 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 TUBG1P23258 451 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 WNT5AP41221 380 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 SCRN3Q0VDG4 424 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 HFEQ30201 348 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 LIPNQ5VXI9 398 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 ZNF774Q6NX45 483 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 ZER1Q7Z7L7 766 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 PHC2Q8IXK0 858 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 ZNF101Q8IZC7 436 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 ABHD4Q8TB40 342 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 SLC25A40Q8TBP6 338 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 KLF14Q8TD94 323 aaPredicted RBP15.15■□□□□ 0.02
TPM1-203ENST00000317516 FAM46AQ96IP4 442 aaKnown RBP15.15■□□□□ 0.02
TPM1-203ENST00000317516 C4orf45Q96LM5 186 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 EGLN1Q9GZT9 426 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 NARFLQ9H6Q4 476 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 GORASP2Q9H8Y8 452 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 SAP30LQ9HAJ7 183 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 TUBG2Q9NRH3 451 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 CGGBP1Q9UFW8 167 aaPredicted RBP15.15■□□□□ 0.02
TPM1-203ENST00000317516 SIGLEC7Q9Y286 467 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 ADAM18Q9Y3Q7 739 aa15.15■□□□□ 0.02
TPM1-203ENST00000317516 ANK3Q12955 4377 aaKnown RBP15.14■□□□□ 0.01
TPM1-203ENST00000317516 MXRA5Q9NR99 2828 aa15.14■□□□□ 0.01
TPM1-203ENST00000317516 MALRD1Q5VYJ5 2156 aa15.14■□□□□ 0.01
TPM1-203ENST00000317516 H7C1C5 153 aa15.14■□□□□ 0.01
TPM1-203ENST00000317516 ICMTO60725 284 aa15.14■□□□□ 0.01
TPM1-203ENST00000317516 PTP4A3O75365 173 aa15.14■□□□□ 0.01
TPM1-203ENST00000317516 SDHAP31040 664 aa15.14■□□□□ 0.01
TPM1-203ENST00000317516 PPP1CBP62140 327 aa15.14■□□□□ 0.01
TPM1-203ENST00000317516 LCN6P62502 163 aa15.14■□□□□ 0.01
TPM1-203ENST00000317516 GLO1Q04760 184 aa15.14■□□□□ 0.01
TPM1-203ENST00000317516 ENDOGQ14249 297 aaKnown RBP15.14■□□□□ 0.01
TPM1-203ENST00000317516 TSTQ16762 297 aaKnown RBP15.14■□□□□ 0.01
TPM1-203ENST00000317516 ZMAT1Q5H9K5 638 aa15.14■□□□□ 0.01
TPM1-203ENST00000317516 SPATA46Q5T0L3 261 aa15.14■□□□□ 0.01
TPM1-203ENST00000317516 USP51Q70EK9 711 aa15.14■□□□□ 0.01
TPM1-203ENST00000317516 TSEN54Q7Z6J9 526 aaKnown RBP15.14■□□□□ 0.01
TPM1-203ENST00000317516 ELMOD3Q96FG2 381 aa15.14■□□□□ 0.01
TPM1-203ENST00000317516 TIMD4Q96H15 378 aa15.14■□□□□ 0.01
TPM1-203ENST00000317516 C7orf34Q96L11 122 aa15.14■□□□□ 0.01
TPM1-203ENST00000317516 DIRC2Q96SL1 478 aa15.14■□□□□ 0.01
TPM1-203ENST00000317516 OR2J1Q9GZK6 312 aa15.14■□□□□ 0.01
TPM1-203ENST00000317516 NRIP3Q9NQ35 241 aa15.14■□□□□ 0.01
TPM1-203ENST00000317516 TREM2Q9NZC2 230 aa15.14■□□□□ 0.01
TPM1-203ENST00000317516 GRIP1Q9Y3R0 1128 aa15.14■□□□□ 0.01
TPM1-203ENST00000317516 STAB1Q9NY15 2570 aa15.13■□□□□ 0.01
TPM1-203ENST00000317516 TEX13CA0A0J9YWL9 993 aa15.13■□□□□ 0.01
TPM1-203ENST00000317516 SPRY3O43610 288 aa15.13■□□□□ 0.01
TPM1-203ENST00000317516 KHDRBS3O75525 346 aaKnown RBP15.13■□□□□ 0.01
TPM1-203ENST00000317516 ABHD16AO95870 558 aa15.13■□□□□ 0.01
TPM1-203ENST00000317516 MSMBP08118 114 aa15.13■□□□□ 0.01
TPM1-203ENST00000317516 GAAP10253 952 aa15.13■□□□□ 0.01
TPM1-203ENST00000317516 OMPP47874 163 aa15.13■□□□□ 0.01
TPM1-203ENST00000317516 MMP15P51511 669 aa15.13■□□□□ 0.01
TPM1-203ENST00000317516 RPS6KA3P51812 740 aa15.13■□□□□ 0.01
TPM1-203ENST00000317516 KRR1Q13601 381 aaKnown RBP15.13■□□□□ 0.01
TPM1-203ENST00000317516 MESTQ5EB52 335 aa15.13■□□□□ 0.01
TPM1-203ENST00000317516 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.13■□□□□ 0.015e-6■■■□□ 16.3
TPM1-203ENST00000317516 DPY19L2P2Q6ZN68 376 aa15.13■□□□□ 0.01
TPM1-203ENST00000317516 FAM122BQ7Z309 247 aa15.13■□□□□ 0.01
TPM1-203ENST00000317516 ADCK1Q86TW2 530 aa15.13■□□□□ 0.01
TPM1-203ENST00000317516 OR51F2Q8NH61 342 aa15.13■□□□□ 0.01
TPM1-203ENST00000317516 IPCEF1Q8WWN9 437 aaPredicted RBP15.13■□□□□ 0.01
TPM1-203ENST00000317516 RAB1CQ92928 201 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms