RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 GUSBP08236 651 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 RPS25P62851 125 aaKnown RBP13.06□□□□□ -0.32
TRIM25-201ENST00000316881 DUSP8Q13202 625 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 FOXB2Q5VYV0 432 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 OR52N1Q8NH53 320 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 C5orf49A4QMS7 147 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 XRCC2O43543 280 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 GMDSO60547 372 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 ARRB2P32121 409 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 SFXN4Q6P4A7 337 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 OVCH1Q7RTY7 1134 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 DPPA2Q7Z7J5 298 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 DEFB108BQ8NET1 73 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 B3GALT5Q9Y2C3 310 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 R4GN57 208 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 NCR1O76036 304 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 JUNBP17275 347 aaPredicted RBP13.06□□□□□ -0.32
TRIM25-201ENST00000316881 GLRA1P23415 457 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 IL11RAQ14626 422 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 OLIG3Q7RTU3 272 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 ZNF573Q86YE8 665 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 CMTM2Q8TAZ6 248 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 OR2M2Q96R28 347 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 SLC38A1Q9H2H9 487 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 PTPRZ1P23471 2315 aaPredicted RBP13.06□□□□□ -0.32
TRIM25-201ENST00000316881 K7EQM0 130 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 HS3ST1O14792 307 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 PHF1O43189 567 aaPredicted RBP13.06□□□□□ -0.32
TRIM25-201ENST00000316881 SCG5P05408 212 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 SLCO4A1Q96BD0 722 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 PRR14Q9BWN1 585 aa13.06□□□□□ -0.32
TRIM25-201ENST00000316881 TMPRSS11DO60235 418 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 TBPP20226 339 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 RAB6AP20340 208 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 PGFP49763 221 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 RNF4P78317 190 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 LSRQ86X29 649 aaPredicted RBP13.05□□□□□ -0.32
TRIM25-201ENST00000316881 OLIG1Q8TAK6 271 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 C19orf43Q9BQ61 176 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 GPR173Q9NS66 373 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 ASH2LQ9UBL3 628 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 CTSLP07711 333 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 PRPH2P23942 346 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 SHC1P29353 583 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 SUMO3P55854 103 aaPredicted RBP13.05□□□□□ -0.32
TRIM25-201ENST00000316881 ACKR1Q16570 336 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 OGFOD3Q6PK18 319 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 CATSPERDQ86XM0 798 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 OR2V1Q8NHB1 315 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 TCTEX1D2Q8WW35 142 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 LRFN5Q96NI6 719 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 SLC22A11Q9NSA0 550 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 M0R135 149 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 LCMT2O60294 686 aaKnown RBP13.05□□□□□ -0.32
TRIM25-201ENST00000316881 PLA2G7Q13093 441 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 ZNF74Q16587 644 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 TCTN3Q6NUS6 607 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 ZNF321PQ8N8H1 164 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 SLAMF6Q96DU3 332 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 ZNF799Q96GE5 643 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 C1QTNF3Q9BXJ4 246 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 NTNG1Q9Y2I2 539 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 HDGFL3Q9Y3E1 203 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 SDHAP31040 664 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 RAP2BP61225 183 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 ZNF546Q86UE3 836 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 FAM109AQ8N4B1 249 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 ARIH2OSQ8N7S6 290 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 NIPSNAP1Q9BPW8 284 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 FAM173AQ9BQD7 235 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 JAM3Q9BX67 310 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 TNFRSF12AQ9NP84 129 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 ISYNA1Q9NPH2 558 aa13.05□□□□□ -0.32
TRIM25-201ENST00000316881 MYO10Q9HD67 2058 aa13.04□□□□□ -0.32
TRIM25-201ENST00000316881 A0A096LPE4 126 aa13.04□□□□□ -0.32
TRIM25-201ENST00000316881 A0A1W2PPZ6 126 aa13.04□□□□□ -0.32
TRIM25-201ENST00000316881 OR8U8P0C7N1 319 aa13.04□□□□□ -0.32
TRIM25-201ENST00000316881 MMP11P24347 488 aa13.04□□□□□ -0.32
TRIM25-201ENST00000316881 OR1C1Q15619 314 aa13.04□□□□□ -0.32
TRIM25-201ENST00000316881 KANSL1Q7Z3B3 1105 aa13.04□□□□□ -0.32
TRIM25-201ENST00000316881 SPACA9Q96E40 222 aaPredicted RBP13.04□□□□□ -0.32
TRIM25-201ENST00000316881 TMEM30AQ9NV96 361 aa13.04□□□□□ -0.32
TRIM25-201ENST00000316881 HMGN4O00479 90 aa13.04□□□□□ -0.32
TRIM25-201ENST00000316881 RFC3P40938 356 aa13.04□□□□□ -0.32
TRIM25-201ENST00000316881 SRP9P49458 86 aaKnown RBP13.04□□□□□ -0.32
TRIM25-201ENST00000316881 MCCD1P59942 119 aaPredicted RBP13.04□□□□□ -0.32
TRIM25-201ENST00000316881 NRARPQ7Z6K4 114 aa13.04□□□□□ -0.32
TRIM25-201ENST00000316881 NAA40Q86UY6 237 aa13.04□□□□□ -0.32
TRIM25-201ENST00000316881 NKAIN4Q8IVV8 208 aa13.04□□□□□ -0.32
TRIM25-201ENST00000316881 PRSS35Q8N3Z0 413 aa13.04□□□□□ -0.32
TRIM25-201ENST00000316881 LIN37Q96GY3 246 aaPredicted RBP13.04□□□□□ -0.32
TRIM25-201ENST00000316881 RREB1Q92766 1687 aa13.04□□□□□ -0.32
TRIM25-201ENST00000316881 TRGV5A0A0B4J1U4 118 aa13.04□□□□□ -0.32
TRIM25-201ENST00000316881 OMGP23515 440 aa13.04□□□□□ -0.32
TRIM25-201ENST00000316881 LAP3P28838 519 aa13.04□□□□□ -0.32
TRIM25-201ENST00000316881 GDNFP39905 211 aa13.04□□□□□ -0.32
TRIM25-201ENST00000316881 HABP2Q14520 560 aaPredicted RBP13.04□□□□□ -0.32
TRIM25-201ENST00000316881 TRIP6Q15654 476 aaKnown RBP13.04□□□□□ -0.32
TRIM25-201ENST00000316881 KDM4DQ6B0I6 523 aa13.04□□□□□ -0.32
TRIM25-201ENST00000316881 TFAP2EQ6VUC0 442 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms