RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 RASSF2P50749 326 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 TAF11Q15544 211 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 ANKDD1AQ495B1 522 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 TMEM154Q6P9G4 183 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 BCDIN3DQ7Z5W3 292 aaKnown RBP10.38□□□□□ -0.75
SCFD1-201ENST00000311943 YTHDF3Q7Z739 585 aaKnown RBP10.38□□□□□ -0.75
SCFD1-201ENST00000311943 DTX2Q86UW9 622 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 NAA40Q86UY6 237 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 ZNF511Q8NB15 262 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 DGCR6LQ9BY27 220 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 OR2H1Q9GZK4 316 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 WDR76Q9H967 626 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 MRPL22Q9NWU5 206 aaKnown RBP10.38□□□□□ -0.75
SCFD1-201ENST00000311943 DNAJB9Q9UBS3 223 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 C5orf49A4QMS7 147 aa10.37□□□□□ -0.75
SCFD1-201ENST00000311943 C5orf63A6NC05 138 aa10.37□□□□□ -0.75
SCFD1-201ENST00000311943 EBAG9O00559 213 aa10.37□□□□□ -0.75
SCFD1-201ENST00000311943 ARPC3O15145 178 aa10.37□□□□□ -0.75
SCFD1-201ENST00000311943 SSX4O60224 188 aa10.37□□□□□ -0.75
SCFD1-201ENST00000311943 FARS2O95363 451 aaKnown RBP10.37□□□□□ -0.75
SCFD1-201ENST00000311943 HOXB1P14653 301 aaPredicted RBP10.37□□□□□ -0.75
SCFD1-201ENST00000311943 NR4A1P22736 598 aa10.37□□□□□ -0.75
SCFD1-201ENST00000311943 DAG1Q14118 895 aa10.37□□□□□ -0.75
SCFD1-201ENST00000311943 SWI5Q1ZZU3 235 aa10.37□□□□□ -0.75
SCFD1-201ENST00000311943 GPR139Q6DWJ6 353 aa10.37□□□□□ -0.75
SCFD1-201ENST00000311943 NANOS1Q8WY41 292 aaKnown RBP10.37□□□□□ -0.75
SCFD1-201ENST00000311943 PIGTQ969N2 578 aa10.37□□□□□ -0.75
SCFD1-201ENST00000311943 POM121L2Q96KW2 1035 aa10.37□□□□□ -0.75
SCFD1-201ENST00000311943 SORCS2Q96PQ0 1159 aa10.37□□□□□ -0.75
SCFD1-201ENST00000311943 PKP2Q99959 881 aa10.37□□□□□ -0.75
SCFD1-201ENST00000311943 TPK1Q9H3S4 243 aa10.37□□□□□ -0.75
SCFD1-201ENST00000311943 KRCC1Q9NPI7 259 aaPredicted RBP10.37□□□□□ -0.75
SCFD1-201ENST00000311943 ZNF701Q9NV72 531 aaPredicted RBP10.37□□□□□ -0.75
SCFD1-201ENST00000311943 MGAT4BQ9UQ53 548 aa10.37□□□□□ -0.75
SCFD1-201ENST00000311943 AP4S1Q9Y587 144 aa10.37□□□□□ -0.75
SCFD1-201ENST00000311943 LHFPL6Q9Y693 200 aa10.37□□□□□ -0.75
SCFD1-201ENST00000311943 SAC3D1A6NKF1 404 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 CENPBD1B2RD01 187 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 LYNX1G3V0Z9 82 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 SMAD7O15105 426 aaKnown RBP10.36□□□□□ -0.75
SCFD1-201ENST00000311943 LYNX1P0DP58 116 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 MSR1P21757 451 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 STOMP27105 288 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 APOBEC3AP31941 199 aaPredicted RBP10.36□□□□□ -0.75
SCFD1-201ENST00000311943 SERPINF1P36955 418 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 IFNGR2P38484 337 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 ALDH3B1P43353 468 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 GLO1Q04760 184 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 RSPO1Q2MKA7 263 aaPredicted RBP10.36□□□□□ -0.75
SCFD1-201ENST00000311943 SLC36A2Q495M3 483 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 CCDC92Q53HC0 331 aaPredicted RBP10.36□□□□□ -0.75
SCFD1-201ENST00000311943 CFAP77Q6ZQR2 320 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 RFPL4BQ6ZWI9 263 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 JAZF1Q86VZ6 243 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 DEPDC4Q8N2C3 294 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 ZNF525Q8N782 197 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 BBS1Q8NFJ9 593 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 OTULINQ96BN8 352 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 KCNS3Q9BQ31 491 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 CCNB1IP1Q9NPC3 277 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 CBLN4Q9NTU7 201 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 BEX4Q9NWD9 120 aaPredicted RBP10.36□□□□□ -0.75
SCFD1-201ENST00000311943 DUSP13Q9UII6 198 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 KHDRBS3O75525 346 aaKnown RBP10.36□□□□□ -0.75
SCFD1-201ENST00000311943 MPV17P39210 176 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 HSF2Q03933 536 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 GINS1Q14691 196 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 FAM205BPQ63HN1 556 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 SPNS3Q6ZMD2 512 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 GLB1L2Q8IW92 636 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 FBXL14Q8N1E6 418 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 LNX2Q8N448 690 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 FAM169BQ8N8A8 192 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 ATG16L2Q8NAA4 619 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 SLC26A10Q8NG04 563 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 PTP4A1Q93096 173 aa10.36□□□□□ -0.75
SCFD1-201ENST00000311943 VRK1Q99986 396 aaPredicted RBP10.36□□□□□ -0.75
SCFD1-201ENST00000311943 RBM4Q9BWF3 364 aaKnown RBP10.36□□□□□ -0.75
SCFD1-201ENST00000311943 APEHP13798 732 aaKnown RBP10.35□□□□□ -0.75
SCFD1-201ENST00000311943 NPR2P20594 1047 aa10.35□□□□□ -0.75
SCFD1-201ENST00000311943 ATP6AP1Q15904 470 aa10.35□□□□□ -0.75
SCFD1-201ENST00000311943 SPRNQ5BIV9 151 aa10.35□□□□□ -0.75
SCFD1-201ENST00000311943 AGAP6Q5VW22 663 aa10.35□□□□□ -0.75
SCFD1-201ENST00000311943 SHQ1Q6PI26 577 aaKnown RBP10.35□□□□□ -0.75
SCFD1-201ENST00000311943 SPATC1Q76KD6 591 aa10.35□□□□□ -0.75
SCFD1-201ENST00000311943 VASH1Q7L8A9 365 aaPredicted RBP10.35□□□□□ -0.75
SCFD1-201ENST00000311943 HDDC2Q7Z4H3 204 aa10.35□□□□□ -0.75
SCFD1-201ENST00000311943 TGIF2LYQ8IUE0 185 aa10.35□□□□□ -0.75
SCFD1-201ENST00000311943 OR52L1Q8NGH7 329 aa10.35□□□□□ -0.75
SCFD1-201ENST00000311943 OR10S1Q8NGN2 331 aa10.35□□□□□ -0.75
SCFD1-201ENST00000311943 GSX2Q9BZM3 304 aa10.35□□□□□ -0.75
SCFD1-201ENST00000311943 OAZ3Q9UMX2 235 aa10.35□□□□□ -0.75
SCFD1-201ENST00000311943 H7C1Q1 480 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 HLA-DQA2P01906 255 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 CST2P09228 141 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 NAT2P11245 290 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 GGT2P36268 569 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 ACTR3P61158 418 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 TNK1Q13470 666 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 ADCK1Q86TW2 530 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms