RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 CORO6Q6QEF8 472 aa18.91■□□□□ 0.62
ATG4D-201ENST00000309469 DEGS2Q6QHC5 323 aa18.91■□□□□ 0.62
ATG4D-201ENST00000309469 TMPRSS12Q86WS5 348 aa18.91■□□□□ 0.62
ATG4D-201ENST00000309469 OR10AC1Q8NH08 325 aa18.91■□□□□ 0.62
ATG4D-201ENST00000309469 ADAMTS14Q8WXS8 1223 aa18.91■□□□□ 0.62
ATG4D-201ENST00000309469 SIGLEC12Q96PQ1 595 aa18.91■□□□□ 0.62
ATG4D-201ENST00000309469 GFI1Q99684 422 aa18.91■□□□□ 0.62
ATG4D-201ENST00000309469 SLITRK2Q9H156 845 aa18.91■□□□□ 0.62
ATG4D-201ENST00000309469 TCF7L1Q9HCS4 588 aa18.91■□□□□ 0.62
ATG4D-201ENST00000309469 CYB5R1Q9UHQ9 305 aa18.91■□□□□ 0.62
ATG4D-201ENST00000309469 BOKQ9UMX3 212 aaPredicted RBP18.91■□□□□ 0.62
ATG4D-201ENST00000309469 TRBV5-7A0A0A0MS05 114 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 ANKRD61A6NGH8 418 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 H0YC42 278 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 DNPH1O43598 174 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 RAF1P04049 648 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 QDPRP09417 244 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 RBMS1P29558 406 aaKnown RBP18.9■□□□□ 0.62
ATG4D-201ENST00000309469 CLDN20P56880 219 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 WIPI1Q5MNZ9 446 aaPredicted RBP18.9■□□□□ 0.62
ATG4D-201ENST00000309469 CATSPERDQ86XM0 798 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 DTX1Q86Y01 620 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 IL17RDQ8NFM7 739 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 OR51A4Q8NGJ6 313 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 SFXN2Q96NB2 322 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 FAM173AQ9BQD7 235 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 OR2B2Q9GZK3 357 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 SEC61A2Q9H9S3 476 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 GTF2A1LQ9UNN4 478 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 SRSF10O75494 262 aaKnown RBP18.9■□□□□ 0.62
ATG4D-201ENST00000309469 SNRPBP14678 240 aaKnown RBP18.9■□□□□ 0.62
ATG4D-201ENST00000309469 GDF1P27539 372 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 RAC3P60763 192 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 LRFN4Q6PJG9 635 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 CLEC1AQ8NC01 280 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 OR9K2Q8NGE7 335 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 OR5H6Q8NGV6 325 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 RNF133Q8WVZ7 376 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 PPP1R14AQ96A00 147 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 SRXN1Q9BYN0 137 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.9■□□□□ 0.62
ATG4D-201ENST00000309469 FBXL3Q9UKT7 428 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 R4GMQ9 66 aa18.9■□□□□ 0.62
ATG4D-201ENST00000309469 PCNX2A6NKB5 2137 aa18.89■□□□□ 0.61
ATG4D-201ENST00000309469 NPIPA2E9PIF3 369 aa18.89■□□□□ 0.61
ATG4D-201ENST00000309469 NPIPA3F8WFD2 350 aa18.89■□□□□ 0.61
ATG4D-201ENST00000309469 TNFRSF10AO00220 468 aa18.89■□□□□ 0.61
ATG4D-201ENST00000309469 SSX4O60224 188 aa18.89■□□□□ 0.61
ATG4D-201ENST00000309469 ENPP1P22413 925 aa18.89■□□□□ 0.61
ATG4D-201ENST00000309469 TALDO1P37837 337 aa18.89■□□□□ 0.61
ATG4D-201ENST00000309469 TAB1Q15750 504 aa18.89■□□□□ 0.61
ATG4D-201ENST00000309469 STAC2Q6ZMT1 411 aa18.89■□□□□ 0.61
ATG4D-201ENST00000309469 LINC00696Q6ZRV3 163 aa18.89■□□□□ 0.61
ATG4D-201ENST00000309469 GGNQ86UU5 652 aa18.89■□□□□ 0.61
ATG4D-201ENST00000309469 Q8N402 240 aa18.89■□□□□ 0.61
ATG4D-201ENST00000309469 ZNF433Q8N7K0 673 aaPredicted RBP18.89■□□□□ 0.61
ATG4D-201ENST00000309469 OR2M7Q8NG81 312 aa18.89■□□□□ 0.61
ATG4D-201ENST00000309469 OR4M1Q8NGD0 313 aa18.89■□□□□ 0.61
ATG4D-201ENST00000309469 BRD7Q9NPI1 651 aa18.89■□□□□ 0.61
ATG4D-201ENST00000309469 CENPMQ9NSP4 180 aa18.89■□□□□ 0.61
ATG4D-201ENST00000309469 FAM86C1Q9NVL1 165 aa18.89■□□□□ 0.61
ATG4D-201ENST00000309469 A0A0B4J203 849 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 CDRT15L2A8MXV6 281 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 EIF1AYO14602 144 aaKnown RBP18.88■□□□□ 0.61
ATG4D-201ENST00000309469 WDPCPO95876 746 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 H2BFMP0C1H6 154 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 TGIF1Q15583 401 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 OR1C1Q15619 314 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 THRSPQ92748 146 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 TMEM106AQ96A25 262 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 SLAMF6Q96DU3 332 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 ZNF385AQ96PM9 386 aaKnown RBP18.88■□□□□ 0.61
ATG4D-201ENST00000309469 C1orf198Q9H425 327 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 EMC7Q9NPA0 242 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 PLA2G3Q9NZ20 509 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 V9GY05 133 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 ARPC4-TTLL3A0A0A6YYG9 625 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 IFITM5A6NNB3 132 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 H3BSH0 61 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 NR2C1P13056 603 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 CDAP32320 146 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 CARD18P57730 90 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 ASAH1Q13510 395 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 ESPNLQ6ZVH7 1005 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 NRARPQ7Z6K4 114 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.88■□□□□ 0.61
ATG4D-201ENST00000309469 TSEN15Q8WW01 171 aaKnown RBP18.88■□□□□ 0.61
ATG4D-201ENST00000309469 OR2M2Q96R28 347 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 GLTPQ9NZD2 209 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 SPATA2Q9UM82 520 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 EMC9Q9Y3B6 208 aa18.88■□□□□ 0.61
ATG4D-201ENST00000309469 OTOGLQ3ZCN5 2332 aa18.87■□□□□ 0.61
ATG4D-201ENST00000309469 A0A0G2JMP0 313 aa18.87■□□□□ 0.61
ATG4D-201ENST00000309469 A0A0X1KG70 313 aa18.87■□□□□ 0.61
ATG4D-201ENST00000309469 LINC00854A0A1B0GVQ3 168 aa18.87■□□□□ 0.61
ATG4D-201ENST00000309469 AIPO00170 330 aa18.87■□□□□ 0.61
ATG4D-201ENST00000309469 SMAD9O15198 467 aaKnown RBP18.87■□□□□ 0.61
ATG4D-201ENST00000309469 TMEM127O75204 238 aa18.87■□□□□ 0.61
ATG4D-201ENST00000309469 CSNK1A1P48729 337 aa18.87■□□□□ 0.61
ATG4D-201ENST00000309469 STARP49675 285 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms