RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 RETREG3Q86VR2 466 aa9.72□□□□□ -0.85
SYNPO2-201ENST00000307142 OR2Y1Q8NGV0 311 aa9.72□□□□□ -0.85
SYNPO2-201ENST00000307142 SLC39A7Q92504 469 aa9.72□□□□□ -0.85
SYNPO2-201ENST00000307142 GGHQ92820 318 aa9.72□□□□□ -0.85
SYNPO2-201ENST00000307142 NIPSNAP1Q9BPW8 284 aa9.72□□□□□ -0.85
SYNPO2-201ENST00000307142 ETAA1Q9NY74 926 aa9.72□□□□□ -0.85
SYNPO2-201ENST00000307142 B3GALT5Q9Y2C3 310 aa9.72□□□□□ -0.85
SYNPO2-201ENST00000307142 PRELID3BQ9Y3B1 194 aa9.72□□□□□ -0.85
SYNPO2-201ENST00000307142 NUP214P35658 2090 aaPredicted RBP9.72□□□□□ -0.85
SYNPO2-201ENST00000307142 SUMO3P55854 103 aaPredicted RBP9.72□□□□□ -0.85
SYNPO2-201ENST00000307142 TAS2R20P59543 309 aa9.72□□□□□ -0.85
SYNPO2-201ENST00000307142 ZNF91Q05481 1191 aa9.72□□□□□ -0.85
SYNPO2-201ENST00000307142 CLDN22Q8N7P3 220 aa9.72□□□□□ -0.85
SYNPO2-201ENST00000307142 CENPOQ9BU64 300 aa9.72□□□□□ -0.85
SYNPO2-201ENST00000307142 UBQLN3Q9H347 655 aa9.72□□□□□ -0.85
SYNPO2-201ENST00000307142 FAM60AQ9NP50 221 aa9.72□□□□□ -0.85
SYNPO2-201ENST00000307142 GCM1Q9NP62 436 aa9.72□□□□□ -0.85
SYNPO2-201ENST00000307142 GAAP10253 952 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 ADH6P28332 368 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 TNFRSF19Q9NS68 423 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 PILRBQ9UKJ0 227 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 ANKRD61A6NGH8 418 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 APOA2P02652 100 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 LAP3P28838 519 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 CDAP32320 146 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 AKR1C8PQ5T2L2 129 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 TMEM108Q6UXF1 575 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 DOK3Q7L591 496 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 MDGA2Q7Z553 956 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 GHSRQ92847 366 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 SULT4A1Q9BR01 284 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 LIN7BQ9HAP6 207 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 B8ZZF3 427 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 SIRPB1O00241 398 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 LYZL6O75951 148 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 GABRA1P14867 456 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 HCCSP53701 268 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 GSG1Q2KHT4 349 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 UPRTQ96BW1 309 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 CACNG6Q9BXT2 260 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 ZFP64Q9NPA5 681 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 OSGIN2Q9Y236 505 aa9.71□□□□□ -0.85
SYNPO2-201ENST00000307142 PATJQ8NI35 1801 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 TMEM11P17152 192 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 CLDN12P56749 244 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 ISXQ2M1V0 245 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 CEACAM16Q2WEN9 425 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 PLPP7Q8NBV4 271 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 OR4M1Q8NGD0 313 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 OR52I1Q8NGK6 324 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 FNDC9Q8TBE3 224 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 STK35Q8TDR2 534 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 ST8SIA4Q92187 359 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 CNRIP1Q96F85 164 aaPredicted RBP9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 MGAMO43451 1857 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 SLC22A23A1A5C7 686 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 TRABD2BA6NFA1 517 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 BHLHE40O14503 412 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 TFPTP0C1Z6 253 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 MMP11P24347 488 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 MLLT11Q13015 90 aaPredicted RBP9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 FZD5Q13467 585 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 GALEQ14376 348 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 CLPPQ16740 277 aaPredicted RBP9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 CGB2Q6NT52 195 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 GPR155Q7Z3F1 870 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 PRSS42Q7Z5A4 293 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 FJX1Q86VR8 437 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 ZNF573Q86YE8 665 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 ZNF547Q8IVP9 402 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 ARIH2OSQ8N7S6 290 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 KCNG3Q8TAE7 436 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 ZC3H12DA2A288 527 aaKnown RBP9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 ATP1B1P05026 303 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 PNLIPP16233 465 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 GPX2P18283 190 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 C21orf33P30042 268 aaPredicted RBP9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 SNCAP37840 140 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 CAMK2BQ13554 666 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 DNAJC22Q8N4W6 341 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 OR51E1Q8TCB6 317 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 DCUN1D4Q92564 292 aa9.71□□□□□ -0.86
SYNPO2-201ENST00000307142 CAV3P56539 151 aa9.7□□□□□ -0.86
SYNPO2-201ENST00000307142 ZNF616Q08AN1 781 aa9.7□□□□□ -0.86
SYNPO2-201ENST00000307142 LCN10Q6JVE6 187 aa9.7□□□□□ -0.86
SYNPO2-201ENST00000307142 CMTM4Q8IZR5 234 aa9.7□□□□□ -0.86
SYNPO2-201ENST00000307142 RBMXL3Q8N7X1 1067 aaKnown RBP9.7□□□□□ -0.86
SYNPO2-201ENST00000307142 OR51F2Q8NH61 342 aa9.7□□□□□ -0.86
SYNPO2-201ENST00000307142 ZFP57Q9NU63 452 aa9.7□□□□□ -0.86
SYNPO2-201ENST00000307142 MRPS18BQ9Y676 258 aaKnown RBP9.7□□□□□ -0.86
SYNPO2-201ENST00000307142 GABARAPH6UMI1 98 aa9.7□□□□□ -0.86
SYNPO2-201ENST00000307142 MRPS14O60783 128 aaKnown RBP9.7□□□□□ -0.86
SYNPO2-201ENST00000307142 GABARAPO95166 117 aa9.7□□□□□ -0.86
SYNPO2-201ENST00000307142 NRASP01111 189 aa9.7□□□□□ -0.86
SYNPO2-201ENST00000307142 IGHV4-34P06331 123 aa9.7□□□□□ -0.86
SYNPO2-201ENST00000307142 POU4F3Q15319 338 aa9.7□□□□□ -0.86
SYNPO2-201ENST00000307142 SGK3Q96BR1 496 aa9.7□□□□□ -0.86
SYNPO2-201ENST00000307142 RNF32Q9H0A6 362 aa9.7□□□□□ -0.86
SYNPO2-201ENST00000307142 PRDM7Q9NQW5 492 aa9.7□□□□□ -0.86
SYNPO2-201ENST00000307142 KIF25Q9UIL4 384 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms