RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 AADACL4Q5VUY2 407 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 OGFOD3Q6PK18 319 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 ACBD4Q8NC06 268 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 AGBL5Q8NDL9 886 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 NKD1Q969G9 470 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 SLAMF9Q96A28 289 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 MENTQ9BUN1 341 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 EIF5A2Q9GZV4 153 aaKnown RBP9.9□□□□□ -0.82
LSM3-201ENST00000306024 SEMA4GQ9NTN9 838 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 UQCC1Q9NVA1 299 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 SCN8AQ9UQD0 1980 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 A0A1W2PR48 441 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 GSTZ1O43708 216 aaPredicted RBP9.9□□□□□ -0.82
LSM3-201ENST00000306024 NKPD1Q17RQ9 610 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 PLEKHN1Q494U1 663 aaPredicted RBP9.9□□□□□ -0.82
LSM3-201ENST00000306024 TMEM205Q6UW68 189 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 SAP25Q8TEE9 199 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 MR1Q95460 341 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 ISOC2Q96AB3 205 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 PRO1933Q9H354 126 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 POFUT1Q9H488 388 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 MRPS18AQ9NVS2 196 aaKnown RBP9.9□□□□□ -0.82
LSM3-201ENST00000306024 ZFHX2Q9C0A1 2572 aaPredicted RBP9.9□□□□□ -0.82
LSM3-201ENST00000306024 ARGFXA6NJG6 315 aa9.9□□□□□ -0.83
LSM3-201ENST00000306024 ZNF729A6NN14 1252 aaPredicted RBP9.9□□□□□ -0.83
LSM3-201ENST00000306024 MED6O75586 246 aa9.9□□□□□ -0.83
LSM3-201ENST00000306024 CYB5AP00167 134 aa9.9□□□□□ -0.83
LSM3-201ENST00000306024 FBP1P09467 338 aa9.9□□□□□ -0.83
LSM3-201ENST00000306024 RAB6AP20340 208 aa9.9□□□□□ -0.83
LSM3-201ENST00000306024 CALCRP30988 508 aa9.9□□□□□ -0.83
LSM3-201ENST00000306024 TAS2R20P59543 309 aa9.9□□□□□ -0.83
LSM3-201ENST00000306024 SKP2Q13309 424 aa9.9□□□□□ -0.83
LSM3-201ENST00000306024 ZIC1Q15915 447 aa9.9□□□□□ -0.83
LSM3-201ENST00000306024 CYB5R2Q6BCY4 276 aa9.9□□□□□ -0.83
LSM3-201ENST00000306024 ZNF793Q6ZN11 406 aa9.9□□□□□ -0.83
LSM3-201ENST00000306024 PPP1R3BQ86XI6 285 aa9.9□□□□□ -0.83
LSM3-201ENST00000306024 NKAIN4Q8IVV8 208 aa9.9□□□□□ -0.83
LSM3-201ENST00000306024 C10orf53Q8N6V4 93 aa9.9□□□□□ -0.83
LSM3-201ENST00000306024 ZNF676Q8N7Q3 588 aa9.9□□□□□ -0.83
LSM3-201ENST00000306024 SLC41A3Q96GZ6 507 aa9.9□□□□□ -0.83
LSM3-201ENST00000306024 OPA3Q9H6K4 179 aa9.9□□□□□ -0.83
LSM3-201ENST00000306024 APMAPQ9HDC9 416 aa9.9□□□□□ -0.83
LSM3-201ENST00000306024 PLXNB3Q9ULL4 1909 aa9.9□□□□□ -0.83
LSM3-201ENST00000306024 EFCAB7A8K855 629 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 C9J4A7 227 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 FBXO45P0C2W1 286 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 ABOP16442 354 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 NME2P22392 152 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 DHODHQ02127 395 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 ZNF750Q32MQ0 723 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 SHISA6Q6ZSJ9 500 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 CAMKMTQ7Z624 323 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 OR9A2Q8NGT5 310 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 NUBPLQ8TB37 319 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 TSEN15Q8WW01 171 aaKnown RBP9.89□□□□□ -0.83
LSM3-201ENST00000306024 FOXRED1Q96CU9 486 aaPredicted RBP9.89□□□□□ -0.83
LSM3-201ENST00000306024 GAL3ST4Q96RP7 486 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 DMRTA2Q96SC8 542 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 CMKLR1Q99788 373 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 SUCNR1Q9BXA5 334 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 DAPP1Q9UN19 280 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 BTBD17A6NE02 478 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 C4orf47A7E2U8 309 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 HMGN4O00479 90 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 PRH1P02810 166 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 VSIG10L2P0DP72 767 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 G0S2P27469 103 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 THBS2P35442 1172 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 RSU1Q15404 277 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 ZNF674Q2M3X9 581 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 VRK2Q86Y07 508 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 ZNF383Q8NA42 475 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 OR56A1Q8NGH5 318 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 GOT1L1Q8NHS2 421 aaPredicted RBP9.89□□□□□ -0.83
LSM3-201ENST00000306024 PPP1R1CQ8WVI7 109 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 WBP1Q96G27 269 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 CLCC1Q96S66 551 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 OR8D2Q9GZM6 311 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 ATG5Q9H1Y0 275 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 FN3KRPQ9HA64 309 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 RHOFQ9HBH0 211 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 PRDM7Q9NQW5 492 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 INPP5EQ9NRR6 644 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 SRPK3Q9UPE1 567 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 MUC22E2RYF6 1773 aaPredicted RBP9.89□□□□□ -0.83
LSM3-201ENST00000306024 MUC6Q6W4X9 2439 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 SCN2AQ99250 2005 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 OR2W5A6NFC9 320 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 A6NLC8 198 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 ELOA3DA6NLF2 546 aaPredicted RBP9.89□□□□□ -0.83
LSM3-201ENST00000306024 G3V3Q6 166 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 AP4M1O00189 453 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 NTN1O95631 604 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 SRMP19623 302 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 MAOAP21397 527 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 TBXA2RP21731 343 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 TSFMP43897 325 aaKnown RBP9.89□□□□□ -0.83
LSM3-201ENST00000306024 LTBQ06643 244 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 BIKQ13323 160 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 ELOA3BQ3SY89 546 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms