RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 HOXD11P31277 338 aaPredicted RBP12.98□□□□□ -0.33
COL1A2-201ENST00000297268 TMEM81Q6P7N7 255 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 OR9K2Q8NGE7 335 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 OR5L1Q8NGL2 311 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 APH1BQ8WW43 257 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 ZNF845Q96IR2 970 aaPredicted RBP12.98□□□□□ -0.33
COL1A2-201ENST00000297268 FN3KRPQ9HA64 309 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 MBNL1Q9NR56 388 aaKnown RBP12.98□□□□□ -0.33
COL1A2-201ENST00000297268 TRAPPC2LQ9UL33 140 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 HCFC2Q9Y5Z7 792 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 AADACP22760 399 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 GCH1P30793 250 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 OR2B8PP59922 312 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 BAP18Q8IXM2 172 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 OR4C16Q8NGL9 310 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 HHIPQ96QV1 700 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 SEMA6CQ9H3T2 930 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 STMND1H3BQB6 276 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 PEX11BO96011 259 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 MCCD1P59942 119 aaPredicted RBP12.98□□□□□ -0.33
COL1A2-201ENST00000297268 RAB11AP62491 216 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 AGERQ15109 404 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 NANPQ8TBE9 248 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 RAB9BQ9NP90 201 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 TRAV1-2A0A0B4J238 106 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 MDFIC2A0A1B0GVS7 189 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 H7C1Q1 480 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 ST8SIA3O43173 380 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 H2AFB1P0C5Y9 115 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 PXNP49023 591 aaPredicted RBP12.98□□□□□ -0.33
COL1A2-201ENST00000297268 EPHA4P54764 986 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 SLC35A1P78382 337 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 CATR1Q13166 79 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 OR1M1Q8NGA1 313 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 OR6K3Q8NGY3 331 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 NARFLQ9H6Q4 476 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 NDRG3Q9UGV2 375 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 PIGLQ9Y2B2 252 aa12.98□□□□□ -0.33
COL1A2-201ENST00000297268 TMEM31Q5JXX7 168 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 PRAMEF20Q5VT98 475 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 UHRF2Q96PU4 802 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 NKX2-4Q9H2Z4 354 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 HAO2Q9NYQ3 351 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 ZNF724A8MTY0 619 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 FZD6O60353 706 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 S100A8P05109 93 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 ZNF239Q16600 458 aaKnown RBP12.97□□□□□ -0.33
COL1A2-201ENST00000297268 TMEM201Q5SNT2 666 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 MANEAQ5SRI9 462 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 FKRPQ9H9S5 495 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 DHCR7Q9UBM7 475 aaKnown RBP12.97□□□□□ -0.33
COL1A2-201ENST00000297268 ZNF346Q9UL40 294 aaKnown RBP12.97□□□□□ -0.33
COL1A2-201ENST00000297268 A4GNTQ9UNA3 340 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 DSCR3O14972 297 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 FGF17O60258 216 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 TUSC2O75896 110 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 MT-ND4LP03901 98 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 FGF9P31371 208 aaPredicted RBP12.97□□□□□ -0.33
COL1A2-201ENST00000297268 FCGR2CP31995 323 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 RPS27P42677 84 aaKnown RBP12.97□□□□□ -0.33
COL1A2-201ENST00000297268 FAM71CQ8NEG0 241 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 RLN3Q8WXF3 142 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 MSI2Q96DH6 328 aaKnown RBP12.97□□□□□ -0.33
COL1A2-201ENST00000297268 BTF3L4Q96K17 158 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 NRSN2Q9GZP1 204 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 SPHK1Q9NYA1 384 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 UPK1AO00322 258 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 BCL2L11O43521 198 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 PRAMEF4O60810 478 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 HLA-HP01893 362 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 GLDNQ6ZMI3 551 aaPredicted RBP12.97□□□□□ -0.33
COL1A2-201ENST00000297268 NUDCD2Q8WVJ2 157 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 SLC6A17Q9H1V8 727 aa12.97□□□□□ -0.33
COL1A2-201ENST00000297268 H1FNTQ75WM6 255 aaPredicted RBP12.96□□□□□ -0.33
COL1A2-201ENST00000297268 DPPA2Q7Z7J5 298 aa12.96□□□□□ -0.33
COL1A2-201ENST00000297268 PPP1R1CQ8WVI7 109 aa12.96□□□□□ -0.33
COL1A2-201ENST00000297268 PLK3Q9H4B4 646 aa12.96□□□□□ -0.33
COL1A2-201ENST00000297268 SCGB2A1O75556 95 aa12.96□□□□□ -0.33
COL1A2-201ENST00000297268 DFFBO76075 338 aa12.96□□□□□ -0.33
COL1A2-201ENST00000297268 BAGE3Q86Y29 109 aa12.96□□□□□ -0.33
COL1A2-201ENST00000297268 BAGE2Q86Y30 109 aa12.96□□□□□ -0.33
COL1A2-201ENST00000297268 CPT1CQ8TCG5 803 aa12.96□□□□□ -0.33
COL1A2-201ENST00000297268 NXPE3Q969Y0 559 aa12.96□□□□□ -0.33
COL1A2-201ENST00000297268 THAP10Q9P2Z0 257 aaPredicted RBP12.96□□□□□ -0.33
COL1A2-201ENST00000297268 PYCARD-AS1I3L0S3 204 aa12.96□□□□□ -0.33
COL1A2-201ENST00000297268 ZNF354AO60765 605 aaPredicted RBP12.96□□□□□ -0.33
COL1A2-201ENST00000297268 MRPL33O75394 65 aaKnown RBP12.96□□□□□ -0.33
COL1A2-201ENST00000297268 GNB3P16520 340 aa12.96□□□□□ -0.33
COL1A2-201ENST00000297268 DUSP1P28562 367 aa12.96□□□□□ -0.33
COL1A2-201ENST00000297268 PSMB3P49720 205 aa12.96□□□□□ -0.33
COL1A2-201ENST00000297268 EMC4Q5J8M3 183 aa12.96□□□□□ -0.33
COL1A2-201ENST00000297268 AAED1Q7RTV5 226 aa12.96□□□□□ -0.33
COL1A2-201ENST00000297268 OR5M1Q8NGP8 315 aa12.96□□□□□ -0.33
COL1A2-201ENST00000297268 MAP3K3Q99759 626 aa12.96□□□□□ -0.33
COL1A2-201ENST00000297268 UFSP2Q9NUQ7 469 aa12.96□□□□□ -0.33
COL1A2-201ENST00000297268 AK3Q9UIJ7 227 aa12.96□□□□□ -0.33
COL1A2-201ENST00000297268 HSD17B6O14756 317 aa12.96□□□□□ -0.34
COL1A2-201ENST00000297268 GRB2P62993 217 aaKnown RBP12.96□□□□□ -0.34
COL1A2-201ENST00000297268 EGR3Q06889 387 aa12.96□□□□□ -0.34
COL1A2-201ENST00000297268 GRINAQ7Z429 371 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms