RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 A0A0A6YYJ9 748 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 NAP1L6A6NFF2 107 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 IFITM5A6NNB3 132 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 PHYHO14832 338 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 ECDO95905 644 aaPredicted RBP15.03■□□□□ -0
CPSF4-201ENST00000292476 ZNF17P17021 662 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 CNR1P21554 472 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 DPP4P27487 766 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 SOX8P57073 446 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 AP3S2P59780 193 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 RPL18Q07020 188 aaKnown RBP15.03■□□□□ -0
CPSF4-201ENST00000292476 RIPPLY1Q0D2K3 151 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 SRSF6Q13247 344 aaKnown RBP15.03■□□□□ -0
CPSF4-201ENST00000292476 KLF9Q13886 244 aaPredicted RBP15.03■□□□□ -0
CPSF4-201ENST00000292476 LYPD4Q6UWN0 246 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 ZNF767PQ75MW2 155 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 BTN2A1Q7KYR7 527 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 CDC20BQ86Y33 519 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 SIAH3Q8IW03 269 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 GTPBP8Q8N3Z3 284 aaPredicted RBP15.03■□□□□ -0
CPSF4-201ENST00000292476 LSM14AQ8ND56 463 aaKnown RBP15.03■□□□□ -0
CPSF4-201ENST00000292476 OR2T4Q8NH00 348 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 LGALS14Q8TCE9 139 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 ZPLD1Q8TCW7 415 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 RAB40AQ8WXH6 277 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 Q96M85 177 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 PDCD1LG2Q9BQ51 273 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 SLITRK2Q9H156 845 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 NUDT15Q9NV35 164 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 LRFN1Q9P244 771 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 DKKL1Q9UK85 242 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 FBXL2Q9UKC9 423 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 BOLA1Q9Y3E2 137 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 ETV7Q9Y603 341 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 TMEM14AQ9Y6G1 99 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 ZNF780AO75290 641 aaPredicted RBP15.03■□□□□ -0
CPSF4-201ENST00000292476 DGCR2P98153 550 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 EGR3Q06889 387 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 Q5BKY6 102 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 FGD2Q7Z6J4 655 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 VASH2Q86V25 355 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 TIGD4Q8IY51 512 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 HSD17B8Q92506 261 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 RNF166Q96A37 237 aaPredicted RBP15.03■□□□□ -0
CPSF4-201ENST00000292476 TTTY10Q9BZA0 68 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 RANBP3Q9H6Z4 567 aaPredicted RBP15.03■□□□□ -0
CPSF4-201ENST00000292476 MRPS18CQ9Y3D5 142 aaKnown RBP15.03■□□□□ -0
CPSF4-201ENST00000292476 AK6Q9Y3D8 172 aaKnown RBP15.03■□□□□ -0
CPSF4-201ENST00000292476 HDGFL3Q9Y3E1 203 aa15.03■□□□□ -0
CPSF4-201ENST00000292476 TRBV5-5A0A0J9YX44 114 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 GJE1A6NN92 205 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 MASP2O00187 686 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 PIN1P1O15428 100 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 ABHD16AO95870 558 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 RENP00797 406 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 RAF1P04049 648 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 GRPRP30550 384 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 PSMB10P40306 273 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 ZP4Q12836 540 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 ALKBH1Q13686 389 aaKnown RBP15.02□□□□□ -0.01
CPSF4-201ENST00000292476 Q499Y3 187 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 BCL2L15Q5TBC7 163 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 ZNF468Q5VIY5 522 aaPredicted RBP15.02□□□□□ -0.01
CPSF4-201ENST00000292476 ZNF782Q6ZMW2 699 aaPredicted RBP15.02□□□□□ -0.01
CPSF4-201ENST00000292476 H1FNTQ75WM6 255 aaPredicted RBP15.02□□□□□ -0.01
CPSF4-201ENST00000292476 MDGA2Q7Z553 956 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 LSRQ86X29 649 aaPredicted RBP15.02□□□□□ -0.01
CPSF4-201ENST00000292476 GALNT16Q8N428 558 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 POC1BQ8TC44 478 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 NSMAFQ92636 917 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 JSRP1Q96MG2 331 aaPredicted RBP15.02□□□□□ -0.01
CPSF4-201ENST00000292476 PIGQQ9BRB3 760 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 CACNG6Q9BXT2 260 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 OR11A1Q9GZK7 315 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 PROK2Q9HC23 129 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 ALKBH4Q9NXW9 302 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 BOKQ9UMX3 212 aaPredicted RBP15.02□□□□□ -0.01
CPSF4-201ENST00000292476 ING4Q9UNL4 249 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 B3GALT5Q9Y2C3 310 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 V9GY05 133 aa15.02□□□□□ -0.01
CPSF4-201ENST00000292476 ANKRD34BA5PLL1 514 aa15.01□□□□□ -0.01
CPSF4-201ENST00000292476 FTCDNL1E5RQL4 147 aa15.01□□□□□ -0.01
CPSF4-201ENST00000292476 GABARAPH6UMI1 98 aa15.01□□□□□ -0.01
CPSF4-201ENST00000292476 MAGEB4O15481 346 aaPredicted RBP15.01□□□□□ -0.01
CPSF4-201ENST00000292476 UPK3AO75631 287 aa15.01□□□□□ -0.01
CPSF4-201ENST00000292476 ALX3O95076 343 aa15.01□□□□□ -0.01
CPSF4-201ENST00000292476 ZFPL1O95159 310 aa15.01□□□□□ -0.01
CPSF4-201ENST00000292476 CD3GP09693 182 aa15.01□□□□□ -0.01
CPSF4-201ENST00000292476 CFPP27918 469 aa15.01□□□□□ -0.01
CPSF4-201ENST00000292476 SRD5A2P31213 254 aa15.01□□□□□ -0.01
CPSF4-201ENST00000292476 CENPAP49450 140 aa15.01□□□□□ -0.01
CPSF4-201ENST00000292476 GXYLT1Q4G148 440 aa15.01□□□□□ -0.01
CPSF4-201ENST00000292476 ELFN2Q5R3F8 820 aa15.01□□□□□ -0.01
CPSF4-201ENST00000292476 LRRN1Q6UXK5 716 aa15.01□□□□□ -0.01
CPSF4-201ENST00000292476 CMTM4Q8IZR5 234 aa15.01□□□□□ -0.01
CPSF4-201ENST00000292476 OR56B4Q8NH76 319 aa15.01□□□□□ -0.01
CPSF4-201ENST00000292476 DEDD2Q8WXF8 326 aa15.01□□□□□ -0.01
CPSF4-201ENST00000292476 RGP1Q92546 391 aaPredicted RBP15.01□□□□□ -0.01
CPSF4-201ENST00000292476 MAP6Q96JE9 813 aa15.01□□□□□ -0.01
CPSF4-201ENST00000292476 KLHL15Q96M94 604 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms