RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 NR4A2P43354 598 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 OMPP47874 163 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 LIMS1P48059 325 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 GDI2P50395 445 aaKnown RBP8.39□□□□□ -1.07
CCDC58-201ENST00000291458 KLF3P57682 345 aaPredicted RBP8.39□□□□□ -1.07
CCDC58-201ENST00000291458 PPP1R8Q12972 351 aaKnown RBP8.39□□□□□ -1.07
CCDC58-201ENST00000291458 DGCR6Q14129 220 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 TAF11Q15544 211 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 TRIP10Q15642 601 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 FXNQ16595 210 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 C6orf52Q5T4I8 152 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 C1orf94Q6P1W5 598 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 RINLQ6ZS11 566 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 RFPL4BQ6ZWI9 263 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 PRIMA1Q86XR5 153 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 ZDHHC21Q8IVQ6 265 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 ZNF101Q8IZC7 436 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 RNF113BQ8IZP6 322 aaKnown RBP8.39□□□□□ -1.07
CCDC58-201ENST00000291458 FITM2Q8N6M3 262 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 ARIH2OSQ8N7S6 290 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 CCDC197Q8NCU1 140 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 CPEB3Q8NE35 698 aaKnown RBP8.39□□□□□ -1.07
CCDC58-201ENST00000291458 OR1J2Q8NGS2 313 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 OR1J1Q8NGS3 322 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 ABHD4Q8TB40 342 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 UBASH3BQ8TF42 649 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 C7orf34Q96L11 122 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 SNX18Q96RF0 628 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 ZNF416Q9BWM5 594 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 OR2H1Q9GZK4 316 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 WNT5BQ9H1J7 359 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 SYT4Q9H2B2 425 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 LRMDAQ9H2I8 198 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 FN3KQ9H479 309 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 ANKRD19PQ9H560 264 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 SIAEQ9HAT2 523 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 CD300AQ9UGN4 299 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 ADAM21Q9UKJ8 722 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 SIGLEC7Q9Y286 467 aa8.39□□□□□ -1.07
CCDC58-201ENST00000291458 SONP18583 2426 aaKnown RBP8.39□□□□□ -1.07
CCDC58-201ENST00000291458 MALRD1Q5VYJ5 2156 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 SLC22A23A1A5C7 686 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 NPIPB13A6NJU9 1138 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 A8MV72 311 aaPredicted RBP8.38□□□□□ -1.07
CCDC58-201ENST00000291458 NPIPB4C9JG80 1138 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 DYNC1I1O14576 645 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 TPD52L2O43399 206 aaKnown RBP8.38□□□□□ -1.07
CCDC58-201ENST00000291458 SLC16A7O60669 478 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 CDC14BO60729 498 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 MPZL1O95297 269 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 STAMBPO95630 424 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 HPXP02790 462 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 SEMG1P04279 462 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 ITGA2P17301 1181 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 IL2RGP31785 369 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 MPV17P39210 176 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 WNT5AP41221 380 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 GUCA1AP43080 201 aaPredicted RBP8.38□□□□□ -1.07
CCDC58-201ENST00000291458 GSK3AP49840 483 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 FXYD6P3P58550 94 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 PSG4Q00888 419 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 LOXL1Q08397 574 aaPredicted RBP8.38□□□□□ -1.07
CCDC58-201ENST00000291458 HNRNPA0Q13151 305 aaKnown RBP8.38□□□□□ -1.07
CCDC58-201ENST00000291458 ENDOGQ14249 297 aaKnown RBP8.38□□□□□ -1.07
CCDC58-201ENST00000291458 MEP1BQ16820 701 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 THEM4Q5T1C6 240 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 SMARCD3Q6STE5 483 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 C8orf86Q6ZUL3 223 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 PTCHD4Q6ZW05 846 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 TMPRSS11FQ6ZWK6 438 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 DPPA2Q7Z7J5 298 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 JAZF1Q86VZ6 243 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 OR9Q2Q8NGE9 314 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 SYNPRQ8TBG9 265 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 SNX33Q8WV41 574 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 TSSK2Q96PF2 358 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 ERMAPQ96PL5 475 aaPredicted RBP8.38□□□□□ -1.07
CCDC58-201ENST00000291458 GPA33Q99795 319 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 SMURF2Q9HAU4 748 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 POLE4Q9NR33 117 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 NDE1Q9NXR1 346 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 COA3Q9Y2R0 106 aaPredicted RBP8.38□□□□□ -1.07
CCDC58-201ENST00000291458 VPS13CQ709C8 3753 aa8.38□□□□□ -1.07
CCDC58-201ENST00000291458 LOC100509620A0A075B734 347 aa8.37□□□□□ -1.07
CCDC58-201ENST00000291458 LOC100289279A0A1B0GTE1 492 aa8.37□□□□□ -1.07
CCDC58-201ENST00000291458 LOC390937A0A1W2PQ73 354 aa8.37□□□□□ -1.07
CCDC58-201ENST00000291458 PRSS37A4D1T9 235 aa8.37□□□□□ -1.07
CCDC58-201ENST00000291458 VWC2LB2RUY7 222 aa8.37□□□□□ -1.07
CCDC58-201ENST00000291458 J3QW42 95 aa8.37□□□□□ -1.07
CCDC58-201ENST00000291458 CRLF1O75462 422 aa8.37□□□□□ -1.07
CCDC58-201ENST00000291458 PTHP01270 115 aa8.37□□□□□ -1.07
CCDC58-201ENST00000291458 CST2P09228 141 aa8.37□□□□□ -1.07
CCDC58-201ENST00000291458 SDHAP31040 664 aa8.37□□□□□ -1.07
CCDC58-201ENST00000291458 MAGEB1P43366 347 aa8.37□□□□□ -1.07
CCDC58-201ENST00000291458 HTR5AP47898 357 aa8.37□□□□□ -1.07
CCDC58-201ENST00000291458 ERFP50548 548 aa8.37□□□□□ -1.07
CCDC58-201ENST00000291458 ZNF133P52736 654 aaPredicted RBP8.37□□□□□ -1.07
CCDC58-201ENST00000291458 SELENOVP59797 346 aa8.37□□□□□ -1.07
CCDC58-201ENST00000291458 CCL8P80075 99 aa8.37□□□□□ -1.07
CCDC58-201ENST00000291458 TSTQ16762 297 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms