RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 SETD9Q8NE22 299 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 PROKR2Q8NFJ6 384 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 APH1BQ8WW43 257 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 RFKQ969G6 155 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 MUCL1Q96DR8 90 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 ANKRD60Q9BZ19 345 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 SEC61A2Q9H9S3 476 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 IMPAD1Q9NX62 359 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 ATPIF1Q9UII2 106 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 FBXL3Q9UKT7 428 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 RAB26Q9ULW5 256 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 TIMM10BQ9Y5J6 103 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 LHFPL6Q9Y693 200 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 COMMD3-BMI1R4GMX3 469 aa12.44□□□□□ -0.42
SSBP1-201ENST00000265304 A0A096LPE4 126 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 A0A1W2PPZ6 126 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 PRSS44E7EML9 344 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 J3QRE1 110 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 M0R129 80 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 ICMTO60725 284 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 SEC14L2O76054 403 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 MPZL1O95297 269 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 GNAO1P09471 354 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 COX5BP10606 129 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 ZNF14P17017 642 aaPredicted RBP12.43□□□□□ -0.42
SSBP1-201ENST00000265304 MYF6P23409 242 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 LOXP28300 417 aaPredicted RBP12.43□□□□□ -0.42
SSBP1-201ENST00000265304 GSTT1P30711 240 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 KIR2DL3P43628 341 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 UBE2NP61088 152 aaKnown RBP12.43□□□□□ -0.42
SSBP1-201ENST00000265304 RAB1AP62820 205 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 DBPQ10586 325 aaPredicted RBP12.43□□□□□ -0.42
SSBP1-201ENST00000265304 APOFQ13790 326 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 SGCAQ16586 387 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 SLC36A2Q495M3 483 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 SP5Q6BEB4 398 aaPredicted RBP12.43□□□□□ -0.42
SSBP1-201ENST00000265304 SLC18B1Q6NT16 456 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 SLC16A14Q7RTX9 510 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 EGFL6Q8IUX8 553 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 ZNF511Q8NB15 262 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 LINC01560Q8TB33 94 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 CYGBQ8WWM9 190 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 NANOS1Q8WY41 292 aaKnown RBP12.43□□□□□ -0.42
SSBP1-201ENST00000265304 Q96MT0 163 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 ZNF184Q99676 751 aaPredicted RBP12.43□□□□□ -0.42
SSBP1-201ENST00000265304 SH3GL3Q99963 347 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 NOX3Q9HBY0 568 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 NGBQ9NPG2 151 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 PLCXD1Q9NUJ7 323 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 NPAP1Q9NZP6 1156 aa12.43□□□□□ -0.42
SSBP1-201ENST00000265304 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.43□□□□□ -0.42
SSBP1-201ENST00000265304 ASH1LQ9NR48 2969 aaKnown RBP12.43□□□□□ -0.42
SSBP1-201ENST00000265304 TACC2O95359 2948 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 A0A1W2PPL8 197 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 DEFB108AA8MXU0 73 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 DENRO43583 198 aaKnown RBP12.42□□□□□ -0.42
SSBP1-201ENST00000265304 ENTPD6O75354 484 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 GPANK1O95872 356 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 HLA-HP01893 362 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 SERPINA5P05154 406 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 ZNF32P17041 273 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 SLC15A1P46059 708 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 ENTPD1P49961 510 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 CXCR4P61073 352 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 PSG4Q00888 419 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 GSG1Q2KHT4 349 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 KRTAP27-1Q3LI81 207 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 LCN1P1Q5VSP4 162 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 LAIR2Q6ISS4 152 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 BCDIN3DQ7Z5W3 292 aaKnown RBP12.42□□□□□ -0.42
SSBP1-201ENST00000265304 THAP5Q7Z6K1 395 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 ZNF584Q8IVC4 421 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 ZNF454Q8N9F8 522 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 IL17RDQ8NFM7 739 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 OR51L1Q8NGJ5 315 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 MNTQ99583 582 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 TMEM204Q9BSN7 226 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 MED18Q9BUE0 208 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 YIPF3Q9GZM5 350 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 OR51V1Q9H2C8 321 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 WDR76Q9H967 626 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 EMC7Q9NPA0 242 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 CRIM1Q9NZV1 1036 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 H2AFY2Q9P0M6 372 aaPredicted RBP12.42□□□□□ -0.42
SSBP1-201ENST00000265304 RAI1Q7Z5J4 1906 aaPredicted RBP12.42□□□□□ -0.42
SSBP1-201ENST00000265304 APCP25054 2843 aa12.42□□□□□ -0.42
SSBP1-201ENST00000265304 OR6C6A6NF89 314 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 SNTNA6NMZ2 147 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 FAM171A2A8MVW0 826 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 SIAH2O43255 324 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 CLIC3O95833 236 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 SBK2P0C263 348 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 ALOX5APP20292 161 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 PTAFRP25105 342 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 HOXC12P31275 282 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 CDH11P55287 796 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 CACNA1DQ01668 2161 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 SCRN3Q0VDG4 424 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 POU4F2Q12837 409 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 CDK5R2Q13319 367 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms