RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 CDHR4A6H8M9 788 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 MASP2O00187 686 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 FRS3O43559 492 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 CREBL2O60519 120 aaPredicted RBP17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 ZNF354AO60765 605 aaPredicted RBP17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 SEMA7AO75326 666 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 MT-ND4P03905 459 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 PSMB1P20618 241 aaKnown RBP17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 GANABQ14697 944 aaKnown RBP17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 OR2B11Q5JQS5 317 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 OR7E24Q6IFN5 339 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 TCTN3Q6NUS6 607 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 BAIAP2L2Q6UXY1 529 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 GLDNQ6ZMI3 551 aaPredicted RBP17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 TPRA1Q86W33 373 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 FAM98AQ8NCA5 519 aaKnown RBP17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 ADAMTS17Q8TE56 1095 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 TMEM68Q96MH6 324 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 TCF7L1Q9HCS4 588 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 UBQLN4Q9NRR5 601 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 TREM2Q9NZC2 230 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 NPFFR2Q9Y5X5 522 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 SPTBN4Q9H254 2564 aa17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 TRAPPC13A5PLN9 417 aa17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 NAP1L6A6NFF2 107 aa17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 SNRPGP15A8MWD9 76 aa17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 RNF224P0DH78 156 aa17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 RIDAP52758 137 aaKnown RBP17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 PNLIPRP2P54317 469 aa17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 KLF9Q13886 244 aaPredicted RBP17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 LRR1Q96L50 414 aa17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 ALX4Q9H161 411 aaPredicted RBP17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 GSTZ1O43708 216 aaPredicted RBP17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 ICOSLGO75144 302 aa17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 UTS2O95399 124 aa17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 SOX14O95416 240 aa17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 GAS1P54826 345 aa17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 PLAURQ03405 335 aa17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 FOXC1Q12948 553 aa17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 PDZK1IP1Q13113 114 aa17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 KLHL26Q53HC5 615 aa17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 POLR2J3Q9H1A7 115 aaKnown RBP17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 RNF122Q9H9V4 155 aa17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 CA10Q9NS85 328 aa17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 GHRLQ9UBU3 117 aa17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 KLK13Q9UKR3 277 aa17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 FBXL3Q9UKT7 428 aa17.04■□□□□ 0.32
COL4A3BP-201ENST00000261415 SPDEFO95238 335 aa17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 LIFP15018 202 aa17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 RGS8P57771 180 aaPredicted RBP17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 PON3Q15166 354 aa17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 KRT77Q7Z794 578 aa17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 ZNF485Q8NCK3 441 aa17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 TMEM185AQ8NFB2 350 aa17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 METTL1Q9UBP6 276 aaKnown RBP17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 CARHSP1Q9Y2V2 147 aaKnown RBP17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 LOC390937A0A1W2PQ73 354 aa17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 C1orf196B1AJZ1 125 aa17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 GATBO75879 557 aaKnown RBP17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 OR2J2O76002 312 aa17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 CELP19835 753 aa17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 Q0VFX4 171 aa17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 ELFN2Q5R3F8 820 aa17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 SSX9Q7RTT3 188 aa17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 KLHL36Q8N4N3 616 aa17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 ZFP41Q8N8Y5 198 aa17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 OIT3Q8WWZ8 545 aa17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 NR4A3Q92570 626 aa17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 FUZQ9BT04 418 aa17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 OPA3Q9H6K4 179 aa17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 ZNF69Q9UC07 566 aa17.03■□□□□ 0.32
COL4A3BP-201ENST00000261415 CD8B2A6NJW9 211 aa17.02■□□□□ 0.32
COL4A3BP-201ENST00000261415 SCDO00767 359 aa17.02■□□□□ 0.32
COL4A3BP-201ENST00000261415 FFAR1O14842 300 aa17.02■□□□□ 0.32
COL4A3BP-201ENST00000261415 PRODHO43272 600 aa17.02■□□□□ 0.32
COL4A3BP-201ENST00000261415 LIMS3P0CW19 117 aa17.02■□□□□ 0.32
COL4A3BP-201ENST00000261415 LIMS4P0CW20 117 aa17.02■□□□□ 0.32
COL4A3BP-201ENST00000261415 CD8BP10966 210 aa17.02■□□□□ 0.32
COL4A3BP-201ENST00000261415 HPGDP15428 266 aa17.02■□□□□ 0.32
COL4A3BP-201ENST00000261415 RPA2P15927 270 aa17.02■□□□□ 0.32
COL4A3BP-201ENST00000261415 MGMTP16455 207 aa17.02■□□□□ 0.32
COL4A3BP-201ENST00000261415 TBXA2RP21731 343 aa17.02■□□□□ 0.32
COL4A3BP-201ENST00000261415 MPGP29372 298 aa17.02■□□□□ 0.32
COL4A3BP-201ENST00000261415 DLX5P56178 289 aa17.02■□□□□ 0.32
COL4A3BP-201ENST00000261415 SEC23BQ15437 767 aa17.02■□□□□ 0.32
COL4A3BP-201ENST00000261415 C10orf91Q5T1B1 145 aa17.02■□□□□ 0.32
COL4A3BP-201ENST00000261415 FXYD6-FXYD2A0A087WZ82 144 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 SERINC4A6NH21 518 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 CTDSPLO15194 276 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 RGS9O75916 674 aaPredicted RBP17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 IL5P05113 134 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 THBS2P35442 1172 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 HABP2Q14520 560 aaPredicted RBP17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 C3orf33Q6P1S2 294 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 ZNF613Q6PF04 617 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 VASH2Q86V25 355 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 RELL2Q8NC24 303 aaPredicted RBP17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 TCTEX1D2Q8WW35 142 aa17.01■□□□□ 0.31
COL4A3BP-201ENST00000261415 CPNE4Q96A23 557 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms