RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 ZNF823P16415 610 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 IL32P24001 234 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 HCCSP53701 268 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 TFF3Q07654 80 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 POU4F2Q12837 409 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 PCK2Q16822 640 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 SLC16A9Q7RTY1 509 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 DPY19L4Q7Z388 723 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 LINC00346Q8IVM7 164 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 GGHQ92820 318 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 S100PBPQ96BU1 408 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 HDHD5Q9BXW7 423 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 ASH2LQ9UBL3 628 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 CYB5R1Q9UHQ9 305 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 EXOGQ9Y2C4 368 aaKnown RBP13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 USP9XQ93008 2570 aaPredicted RBP13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 A0A1W2PR80 420 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 WIPF3A6NGB9 483 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 C16orf97H3BN30 126 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 J3QRE1 110 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 HLA-HP01893 362 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 ADRA2AP08913 450 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 CST2P09228 141 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 CCDC159P0C7I6 412 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 CRHBPP24387 322 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 GRNP28799 593 aaKnown RBP13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 ATP6V1E1P36543 226 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 CSNK2BP67870 215 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 TUBA1BP68363 451 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 TUBA4AP68366 448 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 RAB40BQ12829 278 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 TEX30Q5JUR7 227 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 CORO6Q6QEF8 472 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 TUBA1AQ71U36 451 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 SLC16A14Q7RTX9 510 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 C17orf78Q8N4C9 275 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 WDR31Q8NA23 367 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 ZFAND2BQ8WV99 257 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 SGCDQ92629 289 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 RNASE6Q93091 150 aaKnown RBP13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 TSC22D3Q99576 134 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 ACTR6Q9GZN1 396 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 SLC17A5Q9NRA2 495 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 FKBP14Q9NWM8 211 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 PAK1IP1Q9NWT1 392 aaPredicted RBP13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 KCNG2Q9UJ96 466 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 MYRFQ9Y2G1 1151 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 POLR1DQ9Y2S0 133 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 CACNA1CQ13936 2221 aa13.81□□□□□ -0.2
CCDC90B-201ENST00000260054 SPTBN1Q01082 2364 aaKnown RBP13.81□□□□□ -0.2
CCDC90B-201ENST00000260054 OR5H1A6NKK0 313 aa13.81□□□□□ -0.2
CCDC90B-201ENST00000260054 AGFG2O95081 481 aa13.81□□□□□ -0.2
CCDC90B-201ENST00000260054 PEX19P40855 299 aa13.81□□□□□ -0.2
CCDC90B-201ENST00000260054 MVKQ03426 396 aa13.81□□□□□ -0.2
CCDC90B-201ENST00000260054 RBM48Q5RL73 367 aaKnown RBP13.81□□□□□ -0.2
CCDC90B-201ENST00000260054 SLC18B1Q6NT16 456 aa13.81□□□□□ -0.2
CCDC90B-201ENST00000260054 TMEM154Q6P9G4 183 aa13.81□□□□□ -0.2
CCDC90B-201ENST00000260054 C22orf34Q6ZV56 151 aa13.81□□□□□ -0.2
CCDC90B-201ENST00000260054 AHSA2Q719I0 299 aa13.81□□□□□ -0.2
CCDC90B-201ENST00000260054 CDC20BQ86Y33 519 aa13.81□□□□□ -0.2
CCDC90B-201ENST00000260054 SLC35F2Q8IXU6 374 aa13.81□□□□□ -0.2
CCDC90B-201ENST00000260054 ZNF540Q8NDQ6 660 aa13.81□□□□□ -0.2
CCDC90B-201ENST00000260054 STEAP2Q8NFT2 490 aa13.81□□□□□ -0.2
CCDC90B-201ENST00000260054 OR52I1Q8NGK6 324 aa13.81□□□□□ -0.2
CCDC90B-201ENST00000260054 CDADC1Q9BWV3 514 aa13.81□□□□□ -0.2
CCDC90B-201ENST00000260054 NOX3Q9HBY0 568 aa13.81□□□□□ -0.2
CCDC90B-201ENST00000260054 SCOCQ9UIL1 159 aa13.81□□□□□ -0.2
CCDC90B-201ENST00000260054 COPS3Q9UNS2 423 aa13.81□□□□□ -0.2
CCDC90B-201ENST00000260054 KLHDC2Q9Y2U9 406 aa13.81□□□□□ -0.2
CCDC90B-201ENST00000260054 C12orf71A8MTZ7 269 aa13.8□□□□□ -0.2
CCDC90B-201ENST00000260054 PTGES3LE9PB15 166 aa13.8□□□□□ -0.2
CCDC90B-201ENST00000260054 RER1O15258 196 aa13.8□□□□□ -0.2
CCDC90B-201ENST00000260054 MMP7P09237 267 aaPredicted RBP13.8□□□□□ -0.2
CCDC90B-201ENST00000260054 PIPP12273 146 aaPredicted RBP13.8□□□□□ -0.2
CCDC90B-201ENST00000260054 ZNF32P17041 273 aa13.8□□□□□ -0.2
CCDC90B-201ENST00000260054 CAPZA2P47755 286 aa13.8□□□□□ -0.2
CCDC90B-201ENST00000260054 PIGFQ07326 219 aa13.8□□□□□ -0.2
CCDC90B-201ENST00000260054 AQP6Q13520 282 aa13.8□□□□□ -0.2
CCDC90B-201ENST00000260054 KLHL22Q53GT1 634 aa13.8□□□□□ -0.2
CCDC90B-201ENST00000260054 RFLNBQ8N5W9 214 aa13.8□□□□□ -0.2
CCDC90B-201ENST00000260054 OR52N5Q8NH56 324 aa13.8□□□□□ -0.2
CCDC90B-201ENST00000260054 OTOSQ8NHW6 89 aa13.8□□□□□ -0.2
CCDC90B-201ENST00000260054 MAP6Q96JE9 813 aa13.8□□□□□ -0.2
CCDC90B-201ENST00000260054 AMELYQ99218 206 aa13.8□□□□□ -0.2
CCDC90B-201ENST00000260054 TBX5Q99593 518 aa13.8□□□□□ -0.2
CCDC90B-201ENST00000260054 SCN3BQ9NY72 215 aa13.8□□□□□ -0.2
CCDC90B-201ENST00000260054 B3GNT2Q9NY97 397 aa13.8□□□□□ -0.2
CCDC90B-201ENST00000260054 CNOT2Q9NZN8 540 aaKnown RBP13.8□□□□□ -0.2
CCDC90B-201ENST00000260054 GDF2Q9UK05 429 aaPredicted RBP13.8□□□□□ -0.2
CCDC90B-201ENST00000260054 ARPC4-TTLL3A0A0A6YYG9 625 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 EFCAB10A6NFE3 127 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 FADS2O95864 444 aaKnown RBP13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 WNT11O96014 354 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 CD79AP11912 226 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 HOXB1P14653 301 aaPredicted RBP13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 ALOX5APP20292 161 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 HOXC12P31275 282 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 UBE2NP61088 152 aaKnown RBP13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 SLC35A2P78381 396 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 ST3GAL4Q11206 333 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms