RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 SFXN2Q96NB2 322 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 AGAP4Q96P64 663 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 MED28Q9H204 178 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 ZNF768Q9H5H4 540 aaKnown RBP8.14□□□□□ -1.11
CKAP2-201ENST00000258607 MRPL22Q9NWU5 206 aaKnown RBP8.14□□□□□ -1.11
CKAP2-201ENST00000258607 PLEK2Q9NYT0 353 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 AKAP7Q9P0M2 348 aaPredicted RBP8.14□□□□□ -1.11
CKAP2-201ENST00000258607 PADI1Q9ULC6 663 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 A0A1W2PQ72 361 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 NPIPA2E9PIF3 369 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 NPIPA3F8WFD2 350 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 TSPAN2O60636 221 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 SLC43A1O75387 559 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 GUSBP08236 651 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 B4GALT1P15291 398 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 SELENOPP49908 381 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 ACTC1P68032 377 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 ACTA1P68133 377 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 OR52W1Q6IF63 320 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 RPL13AP3Q6NVV1 102 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 XKRXQ6PP77 449 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 OR2AJ1Q8NGZ0 328 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 MIB2Q96AX9 1013 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.14□□□□□ -1.11
CKAP2-201ENST00000258607 DEFB127Q9H1M4 99 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 ST6GALNAC2Q9UJ37 374 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 PCDHGB7Q9Y5F8 929 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 HS3ST3B1Q9Y662 390 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 ARFGEF3Q5TH69 2177 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 IGKV3D-11A0A0A0MRZ8 115 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 LY6G6EA0A0G2JKS1 128 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 OR5H15A6NDH6 313 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 HTR3BO95264 441 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 TACSTD2P09758 323 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 CXCL3P19876 107 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 GALNSP34059 522 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 HTR3AP46098 478 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 ACTA2P62736 377 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 ACTG2P63267 376 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 PMP22Q01453 160 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 SFRP5Q5T4F7 317 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 SLC18B1Q6NT16 456 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 TIPARPQ7Z3E1 657 aaKnown RBP8.14□□□□□ -1.11
CKAP2-201ENST00000258607 PRSS35Q8N3Z0 413 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 OR11G2Q8NGC1 345 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 AKR7LQ8NHP1 331 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 NUDCD2Q8WVJ2 157 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 C11orf40Q8WZ69 217 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 LAT2Q9GZY6 243 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 CALHM2Q9HA72 323 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 SERINC1Q9NRX5 453 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 FOXJ2Q9P0K8 574 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 EXOGQ9Y2C4 368 aaKnown RBP8.14□□□□□ -1.11
CKAP2-201ENST00000258607 U3KQA8 63 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 ACACBO00763 2458 aa8.14□□□□□ -1.11
CKAP2-201ENST00000258607 LOC107986453A0A1B0GWG9 222 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 SLC22A23A1A5C7 686 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 MPIG6BO95866 241 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 ITGA5P08648 1049 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 VAMP1P23763 118 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 PLGLB1Q02325 96 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 AGAP7PQ5VUJ5 663 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 GCNT2Q8N0V5 402 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 GVQW1Q8N7I0 195 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 OR7G1Q8NGA0 311 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 UBALD1Q8TB05 177 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 FGF11Q92914 225 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 SLC6A7Q99884 636 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 PPP1R3EQ9H7J1 279 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 EIF3KQ9UBQ5 218 aaKnown RBP8.13□□□□□ -1.11
CKAP2-201ENST00000258607 HIF3AQ9Y2N7 669 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 CCSO14618 274 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 SYT7O43581 403 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 ANGPTL7O43827 346 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 PTTG1O95997 202 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 ASAH2BP0C7U1 165 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 COL19A1Q14993 1142 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.13□□□□□ -1.11
CKAP2-201ENST00000258607 DMKNQ6E0U4 476 aaPredicted RBP8.13□□□□□ -1.11
CKAP2-201ENST00000258607 OR8H1Q8NGG4 311 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 OR1J4Q8NGS1 313 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 ABHD3Q8WU67 409 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 NAT6Q93015 286 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 SPACA9Q96E40 222 aaPredicted RBP8.13□□□□□ -1.11
CKAP2-201ENST00000258607 HOXD1Q9GZZ0 328 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 INTS1Q8N201 2190 aaKnown RBP8.13□□□□□ -1.11
CKAP2-201ENST00000258607 LRBAP50851 2863 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 TRIM64BA6NI03 449 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 ARGFXA6NJG6 315 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 PLPP3O14495 311 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 TNFSF15O95150 251 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 PNLIPRP2P54317 469 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 BAMBIQ13145 260 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 SLC36A2Q495M3 483 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 C4orf46Q504U0 113 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 RPL22L1Q6P5R6 122 aaKnown RBP8.13□□□□□ -1.11
CKAP2-201ENST00000258607 ZNF782Q6ZMW2 699 aaPredicted RBP8.13□□□□□ -1.11
CKAP2-201ENST00000258607 H1FNTQ75WM6 255 aaPredicted RBP8.13□□□□□ -1.11
CKAP2-201ENST00000258607 MS4A15Q8N5U1 240 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 ZNF485Q8NCK3 441 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms