RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 MED29Q9NX70 200 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 VSX1Q9NZR4 365 aaPredicted RBP4.29□□□□□ -1.72
USP44-201ENST00000258499 SHPKQ9UHJ6 478 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 OPN4Q9UHM6 478 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 KLF15Q9UIH9 416 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 COL4A4P53420 1690 aaPredicted RBP4.29□□□□□ -1.72
USP44-201ENST00000258499 TRAV36DV7A0A075B6V5 113 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 LOC107986453A0A1B0GWG9 222 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 A0A1W2PQF6 199 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 MEGF11A6BM72 1044 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 ZNF726A6NNF4 738 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 SNRPGP15A8MWD9 76 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 F8W036 122 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 J3QRE1 110 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 GSTZ1O43708 216 aaPredicted RBP4.29□□□□□ -1.72
USP44-201ENST00000258499 VSIG10L2P0DP72 767 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 MYF5P13349 255 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 ALOX5APP20292 161 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 DRD1P21728 446 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 CRABP1P29762 137 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 AVPR2P30518 371 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 SLC6A8P48029 635 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 EMP2P54851 167 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 RPS11P62280 158 aaKnown RBP eCLIP4.29□□□□□ -1.72
USP44-201ENST00000258499 BLOC1S1P78537 153 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 FMODQ06828 376 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 PMPCAQ10713 525 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 SLC17A1Q14916 467 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 ZNF169Q14929 603 aaPredicted RBP4.29□□□□□ -1.72
USP44-201ENST00000258499 CEBPEQ15744 281 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 SGCAQ16586 387 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 SWI5Q1ZZU3 235 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 MESTQ5EB52 335 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 FHL5Q5TD97 284 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 C1orf53Q5VUE5 145 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 LCN10Q6JVE6 187 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 TMEM65Q6PI78 240 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 PAPD4Q6PIY7 484 aaKnown RBP4.29□□□□□ -1.72
USP44-201ENST00000258499 FAM219AQ8IW50 185 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 ZNF679Q8IYX0 411 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 OR51A2Q8NGJ7 313 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 TMEM234Q8WY98 164 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 TCTN2Q96GX1 697 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 TIMP4Q99727 224 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 TRAF4Q9BUZ4 470 aaPredicted RBP4.29□□□□□ -1.72
USP44-201ENST00000258499 ABHD6Q9BV23 337 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 SARGQ9BW04 601 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 JAM3Q9BX67 310 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 CRISPLD2Q9H0B8 497 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 FBRSQ9HAH7 460 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 ACKR4Q9NPB9 350 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 PCDHB16Q9NRJ7 776 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 MDC1Q14676 2089 aaKnown RBP4.29□□□□□ -1.72
USP44-201ENST00000258499 TEX13DA0A0J9YY54 714 aaPredicted RBP4.29□□□□□ -1.72
USP44-201ENST00000258499 PRSS37A4D1T9 235 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 OR4C45A6NMZ5 311 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 SNRNP200O75643 2136 aaKnown RBP4.29□□□□□ -1.72
USP44-201ENST00000258499 CRTAPO75718 401 aaPredicted RBP4.29□□□□□ -1.72
USP44-201ENST00000258499 STK17BO94768 372 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 LDOC1O95751 146 aaPredicted RBP4.29□□□□□ -1.72
USP44-201ENST00000258499 PMP2P02689 132 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 HOXB5P09067 269 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 CTLA4P16410 223 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 AMY2BP19961 511 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 PVALBP20472 110 aaPredicted RBP4.29□□□□□ -1.72
USP44-201ENST00000258499 FCARP24071 287 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 HSD17B7P56937 341 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 CLRN1P58418 232 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 RPL27P61353 136 aaKnown RBP4.29□□□□□ -1.72
USP44-201ENST00000258499 FZD5Q13467 585 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 FAM69BQ5VUD6 431 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 C1orf140Q5VVS0 124 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 ZNF585AQ6P3V2 769 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 TMEM81Q6P7N7 255 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 Q6ZS52 159 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 SLC43A2Q8N370 569 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 OR1J4Q8NGS1 313 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 OR6N1Q8NGY5 312 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 PPP1R1CQ8WVI7 109 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 RGP1Q92546 391 aaPredicted RBP4.29□□□□□ -1.72
USP44-201ENST00000258499 PMM1Q92871 262 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 TM4SF19Q96DZ7 209 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 LRRC46Q96FV0 321 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 GDF15Q99988 308 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 HRH4Q9H3N8 390 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 BANF2Q9H503 90 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 SDHAF3Q9NRP4 125 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 MBD2Q9UBB5 411 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 GMEB2Q9UKD1 530 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 OR52A1Q9UKL2 312 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 RPH3AQ9Y2J0 694 aaPredicted RBP4.29□□□□□ -1.72
USP44-201ENST00000258499 RANBP2P49792 3224 aaKnown RBP4.28□□□□□ -1.72
USP44-201ENST00000258499 PRR32B1ATL7 298 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 SHISA8B8ZZ34 492 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 D6RAR5 112 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 F5H5K5 113 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 SLC17A2O00624 439 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 ZNF208O43345 1280 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 KCNAB3O43448 404 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 OR2T1O43869 369 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms