RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 RPS19P39019 145 aaKnown RBP17.29■□□□□ 0.36
PTPRE-201ENST00000254667 EMC7Q9NPA0 242 aa17.29■□□□□ 0.36
PTPRE-201ENST00000254667 ASH2LQ9UBL3 628 aa17.29■□□□□ 0.36
PTPRE-201ENST00000254667 CCDC187A0A096LP49 1063 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 PRSS37A4D1T9 235 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 OR2J2O76002 312 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 THBS3P49746 956 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 WWTR1Q9GZV5 400 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 HBE1P02100 147 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 RAB11AP62491 216 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 HTD2P86397 168 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 KCNJ8Q15842 424 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 HLA-BQ31612 363 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 FAHD1Q6P587 224 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 LGI3Q8N145 548 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 TAAR9Q96RI9 348 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 JAM3Q9BX67 310 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 CNTNAP3Q9BZ76 1288 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 C11orf54Q9H0W9 315 aaPredicted RBP17.28■□□□□ 0.36
PTPRE-201ENST00000254667 IKZF5Q9H5V7 419 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 RPS10P5Q9NQ39 176 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 TMEM200CA6NKL6 621 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 I6L893 689 aaPredicted RBP17.28■□□□□ 0.36
PTPRE-201ENST00000254667 PIAS2O75928 621 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 RAB6AP20340 208 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 EDDM3BP56851 147 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 DOC2BQ14184 412 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 SLAMF9Q96A28 289 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 ARPC5LQ9BPX5 153 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 RANGRFQ9HD47 186 aaPredicted RBP17.28■□□□□ 0.36
PTPRE-201ENST00000254667 SLC22A11Q9NSA0 550 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 GABARAPH6UMI1 98 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 TBX19O60806 448 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 CBR3O75828 277 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 SNAPINO95295 136 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 SLC2A1P11166 492 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 ELK1P19419 428 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 Q6ZS52 159 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 GDPD3Q7L5L3 318 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 BHLHA9Q7RTU4 235 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 ANKRD53Q8N9V6 530 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 OR52H1Q8NGJ2 320 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 OR1N1Q8NGS0 311 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 DEFB127Q9H1M4 99 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 DUSP21Q9H596 190 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 KCNIP2Q9NS61 270 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 LANCL2Q9NS86 450 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 PROCRQ9UNN8 238 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 SLCO4A1Q96BD0 722 aa17.28■□□□□ 0.36
PTPRE-201ENST00000254667 FXYD1O00168 92 aa17.27■□□□□ 0.36
PTPRE-201ENST00000254667 XRCC2O43543 280 aa17.27■□□□□ 0.36
PTPRE-201ENST00000254667 RNF165Q6ZSG1 346 aa17.27■□□□□ 0.36
PTPRE-201ENST00000254667 DPPA2Q7Z7J5 298 aa17.27■□□□□ 0.36
PTPRE-201ENST00000254667 OR11A1Q9GZK7 315 aa17.27■□□□□ 0.36
PTPRE-201ENST00000254667 A0A1W2PNR3 127 aa17.27■□□□□ 0.36
PTPRE-201ENST00000254667 GSTP1P09211 210 aaKnown RBP17.27■□□□□ 0.36
PTPRE-201ENST00000254667 BCKDHBP21953 392 aa17.27■□□□□ 0.36
PTPRE-201ENST00000254667 SSTR2P30874 369 aa17.27■□□□□ 0.36
PTPRE-201ENST00000254667 MRGPRX3Q96LB0 322 aa17.27■□□□□ 0.36
PTPRE-201ENST00000254667 OPALINQ96PE5 141 aa17.27■□□□□ 0.36
PTPRE-201ENST00000254667 ZCCHC4Q9H5U6 513 aa17.27■□□□□ 0.36
PTPRE-201ENST00000254667 PLEKHF2Q9H8W4 249 aa17.27■□□□□ 0.36
PTPRE-201ENST00000254667 CGGBP1Q9UFW8 167 aaPredicted RBP17.27■□□□□ 0.36
PTPRE-201ENST00000254667 FIGNL2A6NMB9 653 aa17.27■□□□□ 0.35
PTPRE-201ENST00000254667 PHF1O43189 567 aaPredicted RBP17.27■□□□□ 0.35
PTPRE-201ENST00000254667 OR8G1Q15617 311 aa17.27■□□□□ 0.35
PTPRE-201ENST00000254667 C20orf85Q9H1P6 137 aa17.27■□□□□ 0.35
PTPRE-201ENST00000254667 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.27■□□□□ 0.35
PTPRE-201ENST00000254667 M0R135 149 aa17.27■□□□□ 0.35
PTPRE-201ENST00000254667 PMP2P02689 132 aa17.27■□□□□ 0.35
PTPRE-201ENST00000254667 HEXAP06865 529 aa17.27■□□□□ 0.35
PTPRE-201ENST00000254667 OGFOD3Q6PK18 319 aa17.27■□□□□ 0.35
PTPRE-201ENST00000254667 SLC22A25Q6T423 547 aa17.27■□□□□ 0.35
PTPRE-201ENST00000254667 ZNF799Q96GE5 643 aa17.27■□□□□ 0.35
PTPRE-201ENST00000254667 TAS2R4Q9NYW5 299 aa17.27■□□□□ 0.35
PTPRE-201ENST00000254667 ENSAO43768 121 aaKnown RBP17.26■□□□□ 0.35
PTPRE-201ENST00000254667 IGHV3-9P01782 118 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 GRPP07492 148 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 HOXC8P31273 242 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 BTG1P62324 171 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 CCL7P80098 99 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 CLN3Q13286 438 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 EIF3IQ13347 325 aaKnown RBP17.26■□□□□ 0.35
PTPRE-201ENST00000254667 HTR4Q13639 388 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 POU4F3Q15319 338 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 C19orf12Q9NSK7 152 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 STMND1H3BQB6 276 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 LINC01387J3KSC0 135 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 M0QYG6 137 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 ARRB2P32121 409 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 FZD2Q14332 565 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 NUMA1Q14980 2115 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 CTU2Q2VPK5 515 aaKnown RBP17.26■□□□□ 0.35
PTPRE-201ENST00000254667 CARFQ8N187 725 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 BBS1Q8NFJ9 593 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 OR51E1Q8TCB6 317 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 TIMD4Q96H15 378 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 UHRF2Q96PU4 802 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 ANKUB1A6NFN9 424 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 IMPA2O14732 288 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms