RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 FUT4P22083 530 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 ZNF81P51508 661 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 PSG4Q00888 419 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 HSF2Q03933 536 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 PIN1Q13526 163 aaPredicted RBP8.73□□□□□ -1.01
VPS50-201ENST00000251739 TAF11Q15544 211 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 HFEQ30201 348 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 SPRNQ5BIV9 151 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 COQ5Q5HYK3 327 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 SPATA46Q5T0L3 261 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 METTL21CQ5VZV1 264 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 PEG10Q86TG7 708 aaKnown RBP8.73□□□□□ -1.01
VPS50-201ENST00000251739 LRRC75AQ8NAA5 344 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 KLF14Q8TD94 323 aaPredicted RBP8.73□□□□□ -1.01
VPS50-201ENST00000251739 SLC26A7Q8TE54 656 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 DYDC1Q8WWB3 177 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 THOC1Q96FV9 657 aaKnown RBP8.73□□□□□ -1.01
VPS50-201ENST00000251739 ZNF583Q96ND8 569 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 SIKE1Q9BRV8 207 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 ALG12Q9BV10 488 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 OR2H1Q9GZK4 316 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 OR2J1Q9GZK6 312 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 MAN2C1Q9NTJ4 1040 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 INTS9Q9NV88 658 aaKnown RBP8.73□□□□□ -1.01
VPS50-201ENST00000251739 CGGBP1Q9UFW8 167 aaPredicted RBP8.73□□□□□ -1.01
VPS50-201ENST00000251739 PCDHB10Q9UN67 800 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 VWFP04275 2813 aa8.73□□□□□ -1.01
VPS50-201ENST00000251739 C5orf49A4QMS7 147 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 HTR3EA5X5Y0 456 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 GMNCA6NCL1 334 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 TRIM77I1YAP6 450 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 SHOX2O60902 331 aaPredicted RBP8.72□□□□□ -1.01
VPS50-201ENST00000251739 NGFP01138 241 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 VIMP08670 466 aaKnown RBP8.72□□□□□ -1.01
VPS50-201ENST00000251739 CST2P09228 141 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 EGR1P18146 543 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 ADRA2CP18825 462 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 DRD4P21917 467 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 GATA3P23771 443 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 LIMS1P48059 325 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 TAS2R41P59536 307 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 ERVK-25P63136 954 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 ACTG1P63261 375 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 ENDOGQ14249 297 aaKnown RBP8.72□□□□□ -1.01
VPS50-201ENST00000251739 TSTQ16762 297 aaKnown RBP8.72□□□□□ -1.01
VPS50-201ENST00000251739 ZNF718Q3SXZ3 478 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 THEM4Q5T1C6 240 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 DCAF12L2Q5VW00 463 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 SHISA2Q6UWI4 295 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 C1orf174Q8IYL3 243 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 CLDN22Q8N7P3 220 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 ZDHHC22Q8N966 263 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 FAM156AQ8NDB6 213 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 ICA1LQ8NDH6 482 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 AKR7LQ8NHP1 331 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 SLC25A40Q8TBP6 338 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 RAB1CQ92928 201 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 DVL3Q92997 716 aaPredicted RBP8.72□□□□□ -1.01
VPS50-201ENST00000251739 LRRC58Q96CX6 371 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 ZMYND19Q96E35 227 aaPredicted RBP8.72□□□□□ -1.01
VPS50-201ENST00000251739 TIMD4Q96H15 378 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 SLC6A7Q99884 636 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 RBM4Q9BWF3 364 aaKnown RBP8.72□□□□□ -1.01
VPS50-201ENST00000251739 SUCNR1Q9BXA5 334 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 CCNB1IP1Q9NPC3 277 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 CYSLTR2Q9NS75 346 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 DECR2Q9NUI1 292 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 DCAF16Q9NXF7 216 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 A4GNTQ9UNA3 340 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 POLR3KQ9Y2Y1 108 aaPredicted RBP8.72□□□□□ -1.01
VPS50-201ENST00000251739 MED31Q9Y3C7 131 aa8.72□□□□□ -1.01
VPS50-201ENST00000251739 WNK1Q9H4A3 2382 aa8.71□□□□□ -1.01
VPS50-201ENST00000251739 A0A0G2JND7 137 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 TMEM238LA0A1B0GVL6 79 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 HMGB1P1B2RPK0 211 aaPredicted RBP8.71□□□□□ -1.02
VPS50-201ENST00000251739 SPRY1O43609 319 aaPredicted RBP8.71□□□□□ -1.02
VPS50-201ENST00000251739 NPPAP01160 153 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 IGHV2-70P01814 119 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 CCNOP22674 350 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 LAP3P28838 519 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 GCH1P30793 250 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 LIPAP38571 399 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 OR1E2P47887 323 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 GDI2P50395 445 aaKnown RBP8.71□□□□□ -1.02
VPS50-201ENST00000251739 RPL27P61353 136 aaKnown RBP8.71□□□□□ -1.02
VPS50-201ENST00000251739 PPP1CBP62140 327 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 CD47Q08722 323 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 HNRNPA0Q13151 305 aaKnown RBP8.71□□□□□ -1.02
VPS50-201ENST00000251739 CYLC2Q14093 348 aaPredicted RBP8.71□□□□□ -1.02
VPS50-201ENST00000251739 SGCAQ16586 387 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 CYBRD1Q53TN4 286 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 ALG10Q5BKT4 473 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 FAM205BPQ63HN1 556 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 ZNF774Q6NX45 483 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 ERICH5Q6P6B1 374 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 OFCC1Q8IZS5 231 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 DEFB108BQ8NET1 73 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 FNDC8Q8TC99 324 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 GEMIN6Q8WXD5 167 aaKnown RBP8.71□□□□□ -1.02
VPS50-201ENST00000251739 PRRC1Q96M27 445 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms