RNA–Protein interactions for RNA: ENST00000250003.3

MYOD1-201, Transcript of myogenic differentiation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MYOD1, Length 1,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYOD1-201ENST00000250003 LIMS3P0CW19 117 aa14.53□□□□□ -0.08
MYOD1-201ENST00000250003 LIMS4P0CW20 117 aa14.53□□□□□ -0.08
MYOD1-201ENST00000250003 ZNF823P16415 610 aa14.53□□□□□ -0.08
MYOD1-201ENST00000250003 PCMT1P22061 227 aa14.53□□□□□ -0.08
MYOD1-201ENST00000250003 CEACAM8P31997 349 aaPredicted RBP14.53□□□□□ -0.08
MYOD1-201ENST00000250003 CD79BP40259 229 aa14.53□□□□□ -0.08
MYOD1-201ENST00000250003 ACTC1P68032 377 aa14.53□□□□□ -0.08
MYOD1-201ENST00000250003 ACTA1P68133 377 aa14.53□□□□□ -0.08
MYOD1-201ENST00000250003 EMX1Q04741 257 aaPredicted RBP14.53□□□□□ -0.08
MYOD1-201ENST00000250003 IRF3Q14653 427 aa14.53□□□□□ -0.08
MYOD1-201ENST00000250003 NEDD8Q15843 81 aa14.53□□□□□ -0.08
MYOD1-201ENST00000250003 FBXW9Q5XUX1 488 aa14.53□□□□□ -0.08
MYOD1-201ENST00000250003 FOXL2NBQ6ZUU3 175 aa14.53□□□□□ -0.08
MYOD1-201ENST00000250003 CDC20BQ86Y33 519 aa14.53□□□□□ -0.08
MYOD1-201ENST00000250003 LINC00346Q8IVM7 164 aa14.53□□□□□ -0.08
MYOD1-201ENST00000250003 OR10H5Q8NGA6 315 aa14.53□□□□□ -0.08
MYOD1-201ENST00000250003 OR2T27Q8NH04 317 aa14.53□□□□□ -0.08
MYOD1-201ENST00000250003 TMIGD2Q96BF3 282 aa14.53□□□□□ -0.08
MYOD1-201ENST00000250003 STARD4Q96DR4 205 aa14.53□□□□□ -0.08
MYOD1-201ENST00000250003 FOXB1Q99853 325 aa14.53□□□□□ -0.08
MYOD1-201ENST00000250003 ZNF649Q9BS31 505 aa14.53□□□□□ -0.08
MYOD1-201ENST00000250003 VCX3AQ9NNX9 186 aa14.53□□□□□ -0.08
MYOD1-201ENST00000250003 ERVK13-1Q9NX77 482 aa14.53□□□□□ -0.08
MYOD1-201ENST00000250003 SPTAN1Q13813 2472 aaKnown RBP14.53□□□□□ -0.08
MYOD1-201ENST00000250003 H3BSA7 217 aa14.52□□□□□ -0.08
MYOD1-201ENST00000250003 ZNF701M0R085 212 aaPredicted RBP14.52□□□□□ -0.08
MYOD1-201ENST00000250003 LRRTM2O43300 516 aa14.52□□□□□ -0.08
MYOD1-201ENST00000250003 CRHP06850 196 aa14.52□□□□□ -0.08
MYOD1-201ENST00000250003 MSR1P21757 451 aa14.52□□□□□ -0.08
MYOD1-201ENST00000250003 CASP6P55212 293 aa14.52□□□□□ -0.08
MYOD1-201ENST00000250003 ZNF85Q03923 595 aa14.52□□□□□ -0.08
MYOD1-201ENST00000250003 TBCEQ15813 527 aaPredicted RBP14.52□□□□□ -0.08
MYOD1-201ENST00000250003 XAF1Q6GPH4 301 aa14.52□□□□□ -0.08
MYOD1-201ENST00000250003 CORO6Q6QEF8 472 aa14.52□□□□□ -0.08
MYOD1-201ENST00000250003 SVOPQ8N4V2 548 aa14.52□□□□□ -0.08
MYOD1-201ENST00000250003 ALG8Q9BVK2 526 aa14.52□□□□□ -0.08
MYOD1-201ENST00000250003 JAM3Q9BX67 310 aa14.52□□□□□ -0.08
MYOD1-201ENST00000250003 NELFAQ9H3P2 528 aa14.52□□□□□ -0.08
MYOD1-201ENST00000250003 ACOT13Q9NPJ3 140 aa14.52□□□□□ -0.08
MYOD1-201ENST00000250003 TMEM38BQ9NVV0 291 aa14.52□□□□□ -0.08
MYOD1-201ENST00000250003 CHCHD3Q9NX63 227 aaKnown RBP14.52□□□□□ -0.08
MYOD1-201ENST00000250003 RSL24D1Q9UHA3 163 aaKnown RBP14.52□□□□□ -0.08
MYOD1-201ENST00000250003 LAMP5Q9UJQ1 280 aa14.52□□□□□ -0.08
MYOD1-201ENST00000250003 ERGIC3Q9Y282 383 aa14.52□□□□□ -0.08
MYOD1-201ENST00000250003 POLR1DQ9Y2S0 133 aa14.52□□□□□ -0.08
MYOD1-201ENST00000250003 CACNA1CQ13936 2221 aa14.52□□□□□ -0.08
MYOD1-201ENST00000250003 NCOA6Q14686 2063 aaPredicted RBP14.52□□□□□ -0.09
MYOD1-201ENST00000250003 A0A0G2JNJ9 132 aa14.52□□□□□ -0.09
MYOD1-201ENST00000250003 ZNF99A8MXY4 864 aaPredicted RBP14.52□□□□□ -0.09
MYOD1-201ENST00000250003 RPL36A-HNRNPH2H7BZ11 118 aa14.52□□□□□ -0.09
MYOD1-201ENST00000250003 MYL12BO14950 172 aa14.52□□□□□ -0.09
MYOD1-201ENST00000250003 TTKP33981 857 aa14.52□□□□□ -0.09
MYOD1-201ENST00000250003 GUCA1AP43080 201 aaPredicted RBP14.52□□□□□ -0.09
MYOD1-201ENST00000250003 CA7P43166 264 aa14.52□□□□□ -0.09
MYOD1-201ENST00000250003 MRPS34P82930 218 aaKnown RBP14.52□□□□□ -0.09
MYOD1-201ENST00000250003 C4orf17Q53FE4 359 aa14.52□□□□□ -0.09
MYOD1-201ENST00000250003 OR2G6Q5TZ20 316 aa14.52□□□□□ -0.09
MYOD1-201ENST00000250003 GPR141Q7Z602 305 aa14.52□□□□□ -0.09
MYOD1-201ENST00000250003 LRRC18Q8N456 261 aa14.52□□□□□ -0.09
MYOD1-201ENST00000250003 OTOSQ8NHW6 89 aa14.52□□□□□ -0.09
MYOD1-201ENST00000250003 ZNF416Q9BWM5 594 aa14.52□□□□□ -0.09
MYOD1-201ENST00000250003 SFXN3Q9BWM7 321 aa14.52□□□□□ -0.09
MYOD1-201ENST00000250003 OPN3Q9H1Y3 402 aaPredicted RBP14.52□□□□□ -0.09
MYOD1-201ENST00000250003 INPP5EQ9NRR6 644 aa14.52□□□□□ -0.09
MYOD1-201ENST00000250003 Q9UFV3 132 aa14.52□□□□□ -0.09
MYOD1-201ENST00000250003 PROCRQ9UNN8 238 aa14.52□□□□□ -0.09
MYOD1-201ENST00000250003 CCDC160A6NGH7 325 aa14.51□□□□□ -0.09
MYOD1-201ENST00000250003 PRR32B1ATL7 298 aa14.51□□□□□ -0.09
MYOD1-201ENST00000250003 E9PLN8 166 aa14.51□□□□□ -0.09
MYOD1-201ENST00000250003 ZNF670-ZNF695F2Z2N8 137 aa14.51□□□□□ -0.09
MYOD1-201ENST00000250003 PSMD9O00233 223 aa14.51□□□□□ -0.09
MYOD1-201ENST00000250003 MAGEB4O15481 346 aaPredicted RBP14.51□□□□□ -0.09
MYOD1-201ENST00000250003 CGAP01215 116 aa14.51□□□□□ -0.09
MYOD1-201ENST00000250003 LCKP06239 509 aa14.51□□□□□ -0.09
MYOD1-201ENST00000250003 ITGA5P08648 1049 aa14.51□□□□□ -0.09
MYOD1-201ENST00000250003 CTSSP25774 331 aa14.51□□□□□ -0.09
MYOD1-201ENST00000250003 ARF1P84077 181 aaKnown RBP14.51□□□□□ -0.09
MYOD1-201ENST00000250003 DOC2BQ14184 412 aa14.51□□□□□ -0.09
MYOD1-201ENST00000250003 RNLSQ5VYX0 342 aa14.51□□□□□ -0.09
MYOD1-201ENST00000250003 KLHL24Q6TFL4 600 aa14.51□□□□□ -0.09
MYOD1-201ENST00000250003 ABHD12BQ7Z5M8 362 aaPredicted RBP14.51□□□□□ -0.09
MYOD1-201ENST00000250003 AMELYQ99218 206 aa14.51□□□□□ -0.09
MYOD1-201ENST00000250003 VKORC1Q9BQB6 163 aa14.51□□□□□ -0.09
MYOD1-201ENST00000250003 MND1Q9BWT6 205 aa14.51□□□□□ -0.09
MYOD1-201ENST00000250003 CDADC1Q9BWV3 514 aa14.51□□□□□ -0.09
MYOD1-201ENST00000250003 PLSCR4Q9NRQ2 329 aa14.51□□□□□ -0.09
MYOD1-201ENST00000250003 ASH2LQ9UBL3 628 aa14.51□□□□□ -0.09
MYOD1-201ENST00000250003 LHFPL6Q9Y693 200 aa14.51□□□□□ -0.09
MYOD1-201ENST00000250003 IL18BPO95998 194 aa14.5□□□□□ -0.09
MYOD1-201ENST00000250003 WNT11O96014 354 aa14.5□□□□□ -0.09
MYOD1-201ENST00000250003 JUNBP17275 347 aaPredicted RBP14.5□□□□□ -0.09
MYOD1-201ENST00000250003 ALOX5APP20292 161 aa14.5□□□□□ -0.09
MYOD1-201ENST00000250003 NPR2P20594 1047 aa14.5□□□□□ -0.09
MYOD1-201ENST00000250003 MPGP29372 298 aa14.5□□□□□ -0.09
MYOD1-201ENST00000250003 EIF2B1Q14232 305 aaKnown RBP14.5□□□□□ -0.09
MYOD1-201ENST00000250003 ENDOGQ14249 297 aaKnown RBP14.5□□□□□ -0.09
MYOD1-201ENST00000250003 GALEQ14376 348 aa14.5□□□□□ -0.09
MYOD1-201ENST00000250003 KCNMB1Q16558 191 aa14.5□□□□□ -0.09
MYOD1-201ENST00000250003 PCK2Q16822 640 aa14.5□□□□□ -0.09
MYOD1-201ENST00000250003 ZNF813Q6ZN06 617 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms