RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 NEUROG3Q9Y4Z2 214 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 TCRBV16S1A1N1A0A5B0 115 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 XRCC3O43542 346 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 DNAJB6O75190 326 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 AKR7A3O95154 331 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 APOC1P02654 83 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 ADRA2AP08913 450 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 OR4E1P0C645 316 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 DAP3P51398 398 aaKnown RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 CAPZA1P52907 286 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 MRPS21P82921 87 aaKnown RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 TAGLNQ01995 201 aaKnown RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 DMRTC1Q5HYR2 192 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 CLLU1Q5K131 121 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 P4HA3Q7Z4N8 544 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 ARIH2OSQ8N7S6 290 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 PNPLA2Q96AD5 504 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 SLC25A21Q9BQT8 299 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 FKRPQ9H9S5 495 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 MCCC2Q9HCC0 563 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF304Q9HCX3 659 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 RPS10P5Q9NQ39 176 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 OR52A1Q9UKL2 312 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 GGT3PA6NGU5 568 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 MTRF1O75570 445 aaKnown RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 ADRB1P08588 477 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 BLVRBP30043 206 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 AKR1C3P42330 323 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 PPP1CAP62136 330 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 B3GNTL1Q67FW5 361 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 OR5T1Q8NG75 326 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 ADAMTS18Q8TE60 1221 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 SDHCQ99643 169 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 B9D1Q9UPM9 204 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 SLC17A4Q9Y2C5 497 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 OR5K3A6NET4 321 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 HSPA12AO43301 675 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 SEC14L5O43304 696 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 NDUFB6O95139 128 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF43P17038 809 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 PI3P19957 117 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 OTX2P32243 289 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 RBM39Q14498 530 aaKnown RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 PEA15Q15121 130 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 EBPQ15125 230 aaKnown RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF674Q2M3X9 581 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 BAHD1Q8TBE0 780 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 GPR119Q8TDV5 335 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 TMED6Q8WW62 240 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 SLC46A1Q96NT5 459 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 DHCR7Q9UBM7 475 aaKnown RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 ARPC4-TTLL3A0A0A6YYG9 625 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 SHISA8B8ZZ34 492 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 GALR3O60755 368 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 STK17BO94768 372 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 GNB3P16520 340 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 OMGP23515 440 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 PLA1AQ53H76 456 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 AGBL4Q5VU57 503 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 SYS1Q8N2H4 156 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 RFLNBQ8N5W9 214 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 DDIT4LQ96D03 193 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF681Q96N22 645 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 LINC00052Q96N35 136 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF649Q9BS31 505 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 C1orf198Q9H425 327 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 EXOGQ9Y2C4 368 aaKnown RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 COA3Q9Y2R0 106 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 FAM96BQ9Y3D0 163 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 A0A1W2PPV9 198 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 SLC22A23A1A5C7 686 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 SERPINF1P36955 418 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 AGFG1P52594 562 aaKnown RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 SLC25A1P53007 311 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 SNRPNP63162 240 aaKnown RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF85Q03923 595 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 DLX2Q07687 328 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 GNMTQ14749 295 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 WDR88Q6ZMY6 472 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 SULF2Q8IWU5 870 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 CDH26Q8IXH8 852 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 GPR137CQ8N3F9 429 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 PIGTQ969N2 578 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 KCNJ16Q9NPI9 418 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 PLEKHJ1Q9NW61 149 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 MRPS28Q9Y2Q9 187 aaKnown RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 TANC1Q9C0D5 1861 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 DIRAS3O95661 229 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 IGHA1P01876 353 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 CELA2BP08218 269 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 ACSM4P0C7M7 580 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 RAB3AP20336 220 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 AVPR2P30518 371 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 MAP2K6P52564 334 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 IAH1Q2TAA2 248 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 GLIPR1L1Q6UWM5 242 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 LRRC18Q8N456 261 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 OR4D6Q8NGJ1 314 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 OR4C3Q8NH37 302 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 DCBLD2Q96PD2 775 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms