RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 SDHAP31040 664 aa18.14■□□□□ 0.49
SOX4-201ENST00000244745 DOC2BQ14184 412 aa18.14■□□□□ 0.49
SOX4-201ENST00000244745 GABRG1Q8N1C3 465 aa18.14■□□□□ 0.49
SOX4-201ENST00000244745 SMIM19Q96E16 107 aa18.14■□□□□ 0.49
SOX4-201ENST00000244745 DIO1P49895 249 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 MAP2K6P52564 334 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 PHLDA2Q53GA4 152 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 C12orf73Q69YU5 71 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 FCRL6Q6DN72 434 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 OR52B4Q8NGK2 314 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 SEMA4CQ9C0C4 833 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 LOC107986453A0A1B0GWG9 222 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 MRPL33O75394 65 aaKnown RBP18.13■□□□□ 0.49
SOX4-201ENST00000244745 CSNK1EP49674 416 aaKnown RBP18.13■□□□□ 0.49
SOX4-201ENST00000244745 KLHDC8BQ8IXV7 354 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 SLC37A2Q8TED4 501 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 TMED6Q8WW62 240 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 DNAJB11Q9UBS4 358 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 NXT1Q9UKK6 140 aaKnown RBP18.13■□□□□ 0.49
SOX4-201ENST00000244745 A4GNTQ9UNA3 340 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 FBXO7Q9Y3I1 522 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 IGHV3-20A0A0C4DH32 117 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 DCTN6O00399 190 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 DUSP23Q9BVJ7 150 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 ADAMTSL1Q8N6G6 1762 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 OR5K3A6NET4 321 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 ARGFXA6NJG6 315 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 EDN3P14138 238 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 TMEM217Q8N7C4 229 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 OR5L1Q8NGL2 311 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 GAREM1Q9H706 876 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 PATZ1Q9HBE1 687 aaKnown RBP18.13■□□□□ 0.49
SOX4-201ENST00000244745 GAB2Q9UQC2 676 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 TUSC2O75896 110 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 CD1CP29017 333 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 TPBGQ13641 420 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 FAM27D1Q5T7N8 215 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 CA13Q8N1Q1 262 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 PATE1Q8WXA2 126 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 GCDHQ92947 438 aaPredicted RBP18.13■□□□□ 0.49
SOX4-201ENST00000244745 SPACA1Q9HBV2 294 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 NECAP2Q9NVZ3 263 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 PRELID3BQ9Y3B1 194 aa18.13■□□□□ 0.49
SOX4-201ENST00000244745 OR5H14A6NHG9 310 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 CDK5R1Q15078 307 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 AAED1Q7RTV5 226 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 TRIM77I1YAP6 450 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 HNF4GQ14541 408 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 PRTGQ2VWP7 1150 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 TMEM41BQ5BJD5 291 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 SHEQ5VZ18 495 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 TSSK2Q96PF2 358 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 OBP2BQ9NPH6 170 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 KCNE3Q9Y6H6 103 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 RGS11O94810 467 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 WNT3P56703 355 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 DCDP81605 110 aaKnown RBP18.12■□□□□ 0.49
SOX4-201ENST00000244745 OTPQ5XKR4 325 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 H1FNTQ75WM6 255 aaPredicted RBP18.12■□□□□ 0.49
SOX4-201ENST00000244745 PCDHGA5Q9Y5G8 931 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 FOCADQ5VW36 1801 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 TLCD2A6NGC4 264 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 MCRIP1C9JLW8 97 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 HSD17B6O14756 317 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 TO15178 435 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 PRKNO60260 465 aaPredicted RBP18.12■□□□□ 0.49
SOX4-201ENST00000244745 S100A8P05109 93 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 PCMT1P22061 227 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 OR1D5P58170 312 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 CAMK2BQ13554 666 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 KCNAB1Q14722 419 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 OR9K2Q8NGE7 335 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 ZFPM2Q8WW38 1151 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 KIF13BQ9NQT8 1826 aa18.12■□□□□ 0.49
SOX4-201ENST00000244745 IFITM5A6NNB3 132 aa18.11■□□□□ 0.49
SOX4-201ENST00000244745 TMEM182Q6ZP80 229 aaPredicted RBP18.11■□□□□ 0.49
SOX4-201ENST00000244745 SUMF1Q8NBK3 374 aa18.11■□□□□ 0.49
SOX4-201ENST00000244745 FN3KRPQ9HA64 309 aa18.11■□□□□ 0.49
SOX4-201ENST00000244745 CBX7O95931 251 aa18.11■□□□□ 0.49
SOX4-201ENST00000244745 CD80P33681 288 aa18.11■□□□□ 0.49
SOX4-201ENST00000244745 RPS27P42677 84 aaKnown RBP18.11■□□□□ 0.49
SOX4-201ENST00000244745 RBMS3Q6XE24 437 aaKnown RBP18.11■□□□□ 0.49
SOX4-201ENST00000244745 CPEB2Q7Z5Q1 589 aaKnown RBP18.11■□□□□ 0.49
SOX4-201ENST00000244745 C1orf87Q8N0U7 546 aa18.11■□□□□ 0.49
SOX4-201ENST00000244745 OR1M1Q8NGA1 313 aa18.11■□□□□ 0.49
SOX4-201ENST00000244745 EMC6Q9BV81 110 aa18.11■□□□□ 0.49
SOX4-201ENST00000244745 A0A0A6YYD5 115 aa18.11■□□□□ 0.49
SOX4-201ENST00000244745 UMAD1C9J7I0 102 aa18.11■□□□□ 0.49
SOX4-201ENST00000244745 LAP3P28838 519 aa18.11■□□□□ 0.49
SOX4-201ENST00000244745 TAS2R30P59541 319 aa18.11■□□□□ 0.49
SOX4-201ENST00000244745 RHBDD1Q8TEB9 315 aa18.11■□□□□ 0.49
SOX4-201ENST00000244745 ANKRD9Q96BM1 317 aaPredicted RBP18.11■□□□□ 0.49
SOX4-201ENST00000244745 TRAPPC2LQ9UL33 140 aa18.11■□□□□ 0.49
SOX4-201ENST00000244745 DOCK1Q14185 1865 aa18.11■□□□□ 0.49
SOX4-201ENST00000244745 H7C1Q1 480 aa18.11■□□□□ 0.49
SOX4-201ENST00000244745 SSR4P51571 173 aa18.11■□□□□ 0.49
SOX4-201ENST00000244745 P2RX1P51575 399 aa18.11■□□□□ 0.49
SOX4-201ENST00000244745 OR2B8PP59922 312 aa18.11■□□□□ 0.49
SOX4-201ENST00000244745 ARG2P78540 354 aa18.11■□□□□ 0.49
SOX4-201ENST00000244745 ADIRFQ15847 76 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms