RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 SCN2AQ99250 2005 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 CENPVL1A0A0U1RR11 272 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 NPIPB13A6NJU9 1138 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 ELOA3DA6NLF2 546 aaPredicted RBP8.36□□□□□ -1.07
TGFB3-201ENST00000238682 A8MVM7 634 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 NPIPB4C9JG80 1138 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 IMPA2O14732 288 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 SEC14L5O43304 696 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 SP1P08047 785 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 PTAFRP25105 342 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 FMO3P31513 532 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 RYKP34925 604 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 RFX3P48380 749 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 RPS16P62249 146 aaKnown RBP8.36□□□□□ -1.07
TGFB3-201ENST00000238682 NPRL3Q12980 569 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 QPRTQ15274 297 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 ELOA3BQ3SY89 546 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 PODNL1Q6PEZ8 512 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 IL20RBQ6UXL0 311 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 ZNF730Q6ZMV8 503 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 RBM45Q8IUH3 476 aaKnown RBP8.36□□□□□ -1.07
TGFB3-201ENST00000238682 GDPD1Q8N9F7 314 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 ELOA3Q8NG57 546 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 DDIT4LQ96D03 193 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 GPR137Q96N19 417 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 DCLRE1CQ96SD1 692 aaKnown RBP8.36□□□□□ -1.07
TGFB3-201ENST00000238682 PITX2Q99697 317 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 NIPSNAP1Q9BPW8 284 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 WFDC6Q9BQY6 131 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 PIGQQ9BRB3 760 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 TTYH2Q9BSA4 534 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 FKRPQ9H9S5 495 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 SLC25A19Q9HC21 320 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 ZFP64Q9NPA5 681 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 ADAM30Q9UKF2 790 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 SLC7A7Q9UM01 511 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 EMC9Q9Y3B6 208 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 HDGFL3Q9Y3E1 203 aa8.36□□□□□ -1.07
TGFB3-201ENST00000238682 TRAV36DV7A0A075B6V5 113 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 NPIPA5A0A0B4J1W7 369 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 CPSF4LA6NMK7 179 aaKnown RBP8.35□□□□□ -1.07
TGFB3-201ENST00000238682 NPIPA7E9PJI5 369 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 ACOT7O00154 380 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 TPST2O60704 377 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 RCBTB2O95199 551 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 MBP02144 154 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 HPNP05981 417 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 NPIPA8P0DM63 369 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 CXCR1P25024 350 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 GPX4P36969 197 aaPredicted RBP8.35□□□□□ -1.07
TGFB3-201ENST00000238682 CD96P40200 585 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 SLC3A1Q07837 685 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 OR1C1Q15619 314 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 PLPPR5Q32ZL2 321 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 RIPPLY2Q5TAB7 128 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 TEX261Q6UWH6 196 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 OR4M1Q8NGD0 313 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 OR4K5Q8NGD3 323 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 OR9Q2Q8NGE9 314 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 DUSP19Q8WTR2 217 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 OSTF1Q92882 214 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 C2orf88Q9BSF0 95 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 COPS4Q9BT78 406 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 CCDC90BQ9GZT6 254 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 ACKR4Q9NPB9 350 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 MED17Q9NVC6 651 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 FLRT3Q9NZU0 649 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 CGGBP1Q9UFW8 167 aaPredicted RBP8.35□□□□□ -1.07
TGFB3-201ENST00000238682 PURGQ9UJV8 347 aaKnown RBP8.35□□□□□ -1.07
TGFB3-201ENST00000238682 NDRG4Q9ULP0 352 aaKnown RBP8.35□□□□□ -1.07
TGFB3-201ENST00000238682 MGAT4AQ9UM21 535 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 TRAPPC4Q9Y296 219 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 U3KQ87 197 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 SLC1A7O00341 560 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 HCN1O60741 890 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 ZNF354AO60765 605 aaPredicted RBP8.35□□□□□ -1.07
TGFB3-201ENST00000238682 SEMA7AO75326 666 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 NEURL1O76050 574 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 GLSO94925 669 aaPredicted RBP8.35□□□□□ -1.07
TGFB3-201ENST00000238682 CELA2AP08217 269 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 ACAA1P09110 424 aaPredicted RBP8.35□□□□□ -1.07
TGFB3-201ENST00000238682 TSPAN19P0C672 248 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 PTBP1P26599 531 aaKnown RBP eCLIP8.35□□□□□ -1.07
TGFB3-201ENST00000238682 LAP3P28838 519 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 OMPP47874 163 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 IDH2P48735 452 aaKnown RBP8.35□□□□□ -1.07
TGFB3-201ENST00000238682 FOXL2P58012 376 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 DYRK1AQ13627 763 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 IRF3Q14653 427 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 SMN1Q16637 294 aaKnown RBP8.35□□□□□ -1.07
TGFB3-201ENST00000238682 CDNFQ49AH0 187 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 DNLZQ5SXM8 178 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 CCDC71Q8IV32 467 aaPredicted RBP8.35□□□□□ -1.07
TGFB3-201ENST00000238682 ZNF808Q8N4W9 903 aaPredicted RBP8.35□□□□□ -1.07
TGFB3-201ENST00000238682 ZFP62Q8NB50 900 aaPredicted RBP8.35□□□□□ -1.07
TGFB3-201ENST00000238682 NDNFQ8TB73 568 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 SLC7A13Q8TCU3 470 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 GTPBP3Q969Y2 492 aaKnown RBP8.35□□□□□ -1.07
TGFB3-201ENST00000238682 DNTTIP1Q9H147 329 aa8.35□□□□□ -1.07
TGFB3-201ENST00000238682 PROK2Q9HC23 129 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms