RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 ARL4DP49703 201 aa16.83■□□□□ 0.28
CPSF3-201ENST00000238112 RGS7BPQ6MZT1 257 aaPredicted RBP16.83■□□□□ 0.28
CPSF3-201ENST00000238112 MDGA2Q7Z553 956 aa16.83■□□□□ 0.28
CPSF3-201ENST00000238112 ZNF454Q8N9F8 522 aa16.83■□□□□ 0.28
CPSF3-201ENST00000238112 OR52N5Q8NH56 324 aa16.83■□□□□ 0.28
CPSF3-201ENST00000238112 DUSP19Q8WTR2 217 aa16.83■□□□□ 0.28
CPSF3-201ENST00000238112 ASB13Q8WXK3 278 aa16.83■□□□□ 0.28
CPSF3-201ENST00000238112 SEH1LQ96EE3 360 aa16.83■□□□□ 0.28
CPSF3-201ENST00000238112 C1QTNF6Q9BXI9 259 aa16.83■□□□□ 0.28
CPSF3-201ENST00000238112 REG4Q9BYZ8 158 aa16.83■□□□□ 0.28
CPSF3-201ENST00000238112 ALX4Q9H161 411 aaPredicted RBP16.83■□□□□ 0.28
CPSF3-201ENST00000238112 MED9Q9NWA0 146 aa16.83■□□□□ 0.28
CPSF3-201ENST00000238112 A0A1W2PPC1 479 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 TCRBV16S1A1N1A0A5B0 115 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 POM121CA8CG34 1229 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 PLPP3O14495 311 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 TO15178 435 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 AHSA1O95433 338 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 PMS2P2O95744 297 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 ITGB2P05107 769 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 FSTP19883 344 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 ABCD3P28288 659 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 CRABP1P29762 137 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 BAMBIQ13145 260 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 RAB30Q15771 203 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 TMEM205Q6UW68 189 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 PRSS42Q7Z5A4 293 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 PRSS58Q8IYP2 241 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 DEFB119Q8N690 84 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 TMEM229BQ8NBD8 167 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 OR6M1Q8NGM8 313 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 OR13C3Q8NGS6 347 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 MVB12AQ96EY5 273 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 ZNF587Q96SQ5 575 aaPredicted RBP16.82■□□□□ 0.28
CPSF3-201ENST00000238112 PRMT8Q9NR22 394 aaPredicted RBP16.82■□□□□ 0.28
CPSF3-201ENST00000238112 CGGBP1Q9UFW8 167 aaPredicted RBP16.82■□□□□ 0.28
CPSF3-201ENST00000238112 GON4LQ3T8J9 2241 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.82■□□□□ 0.28
CPSF3-201ENST00000238112 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.82■□□□□ 0.28
CPSF3-201ENST00000238112 TMEM82A0PJX8 343 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 SORDQ00796 357 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 DEFB133Q30KQ1 61 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 GRINAQ7Z429 371 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 ADGRE4PQ86SQ3 457 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 SLC41A2Q96JW4 573 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 OR11A1Q9GZK7 315 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 PPA2Q9H2U2 334 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 SCPEP1Q9HB40 452 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 COA3Q9Y2R0 106 aaPredicted RBP16.82■□□□□ 0.28
CPSF3-201ENST00000238112 KCNMB2Q9Y691 235 aa16.82■□□□□ 0.28
CPSF3-201ENST00000238112 DCDC2BA2VCK2 349 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 IGHMP01871 453 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 OR4E1P0C645 316 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 IGFBP3P17936 291 aaPredicted RBP16.81■□□□□ 0.28
CPSF3-201ENST00000238112 PNLIPRP2P54317 469 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 TAGLNQ01995 201 aaKnown RBP16.81■□□□□ 0.28
CPSF3-201ENST00000238112 VWA2Q5GFL6 755 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 PRAMEF17Q5VTA0 474 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 TMED4Q7Z7H5 227 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 JAGN1Q8N5M9 183 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 LINC00052Q96N35 136 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 SLC25A21Q9BQT8 299 aaPredicted RBP16.81■□□□□ 0.28
CPSF3-201ENST00000238112 TPSD1Q9BZJ3 242 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 C1orf198Q9H425 327 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 SLC2A4RGQ9NR83 387 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 HHLA2Q9UM44 414 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 EMC9Q9Y3B6 208 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 R4GMQ9 66 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 THADAQ6YHU6 1953 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 MEGF11A6BM72 1044 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 SHISA7A6NL88 538 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 RHPN2P1A8MT19 583 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 H3BUI4 141 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 M0QYG6 137 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 CYB5AP00167 134 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 AMY2AP04746 511 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 MELTFP08582 738 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 FBLP22087 321 aaKnown RBP16.81■□□□□ 0.28
CPSF3-201ENST00000238112 CD38P28907 300 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 NUP62P37198 522 aaPredicted RBP16.81■□□□□ 0.28
CPSF3-201ENST00000238112 CDH26Q8IXH8 852 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 ZNF248Q8NDW4 579 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 GPR119Q8TDV5 335 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 CMKLR1Q99788 373 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 MFFQ9GZY8 342 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 SLCO5A1Q9H2Y9 848 aa16.81■□□□□ 0.28
CPSF3-201ENST00000238112 MRPS18BQ9Y676 258 aaKnown RBP16.81■□□□□ 0.28
CPSF3-201ENST00000238112 SOX1O00570 391 aaPredicted RBP16.8■□□□□ 0.28
CPSF3-201ENST00000238112 OR2T1O43869 369 aa16.8■□□□□ 0.28
CPSF3-201ENST00000238112 MPZL1O95297 269 aa16.8■□□□□ 0.28
CPSF3-201ENST00000238112 ZNF823P16415 610 aa16.8■□□□□ 0.28
CPSF3-201ENST00000238112 CALCRP30988 508 aa16.8■□□□□ 0.28
CPSF3-201ENST00000238112 EFNA3P52797 238 aa16.8■□□□□ 0.28
CPSF3-201ENST00000238112 SLC26A5P58743 744 aa16.8■□□□□ 0.28
CPSF3-201ENST00000238112 SPOCK1Q08629 439 aa16.8■□□□□ 0.28
CPSF3-201ENST00000238112 HYAL4Q2M3T9 481 aa16.8■□□□□ 0.28
CPSF3-201ENST00000238112 C12orf45Q8N5I9 185 aaPredicted RBP16.8■□□□□ 0.28
CPSF3-201ENST00000238112 H3BMH7 237 aa16.8■□□□□ 0.28
CPSF3-201ENST00000238112 RPA2P15927 270 aa16.8■□□□□ 0.28
CPSF3-201ENST00000238112 LBX1P52954 281 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms