RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 JMJD6Q6NYC1 403 aaPredicted RBP11.79□□□□□ -0.52
VAMP4-201ENST00000236192 GDF7Q7Z4P5 450 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 FJX1Q86VR8 437 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 ZNF321PQ8N8H1 164 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 OR51Q1Q8NH59 317 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 OR5R1Q8NH85 324 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 ASB11Q8WXH4 323 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 LAT2Q9GZY6 243 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 TMEM9BQ9NQ34 198 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 SOCS5O75159 536 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 RCC1P18754 421 aaPredicted RBP11.79□□□□□ -0.52
VAMP4-201ENST00000236192 EPHA1P21709 976 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 GABRR1P24046 479 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 NDUFS1P28331 727 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 SFTPDP35247 375 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 PPM1AP35813 382 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 HLA-DRB3P79483 266 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 CCINQ13939 588 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 RIPPLY2Q5TAB7 128 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 GPR137CQ8N3F9 429 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 ZNF439Q8NDP4 499 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 RGP1Q92546 391 aaPredicted RBP11.79□□□□□ -0.52
VAMP4-201ENST00000236192 TSLPQ969D9 159 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 PADI1Q9ULC6 663 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 WSB1Q9Y6I7 421 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 PTHLHP12272 177 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 GUCA2AQ02747 115 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 RTL6Q6ICC9 239 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 NUP54Q7Z3B4 507 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 FAM129CQ86XR2 697 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 OR10A7Q8NGE5 316 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 OR51T1Q8NGJ9 327 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 NXPE3Q969Y0 559 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 FAM103A1Q9BTL3 118 aaKnown RBP11.79□□□□□ -0.52
VAMP4-201ENST00000236192 PLA2G12AQ9BZM1 189 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 NMES1Q9C002 83 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 ZMAT3Q9HA38 289 aaKnown RBP11.79□□□□□ -0.52
VAMP4-201ENST00000236192 GNG13Q9P2W3 67 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 RAB22AQ9UL26 194 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 AMDHD2Q9Y303 409 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 CACNA1SQ13698 1873 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 MDFIC2A0A1B0GVS7 189 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 C9orf170A2RU37 121 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 OR2M5A3KFT3 312 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 TBPP20226 339 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 EMP2P54851 167 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 KRTDAPP60985 99 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 MRPS6P82932 125 aaKnown RBP11.78□□□□□ -0.52
VAMP4-201ENST00000236192 Q6ZN92 141 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 MAML2Q8IZL2 1156 aaPredicted RBP11.78□□□□□ -0.52
VAMP4-201ENST00000236192 TOGARAM1Q9Y4F4 1720 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 IGKV6-21A0A0C4DH24 114 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.78□□□□□ -0.52
VAMP4-201ENST00000236192 GRXCR1A8MXD5 290 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 HTR5AP47898 357 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 ZFP36L2P47974 494 aaKnown RBP11.78□□□□□ -0.52
VAMP4-201ENST00000236192 PNLIPRP2P54317 469 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 OR1Q1Q15612 314 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 TMEM123Q8N131 208 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 NAA11Q9BSU3 229 aaPredicted RBP11.78□□□□□ -0.52
VAMP4-201ENST00000236192 ZCCHC4Q9H5U6 513 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 FZD3Q9NPG1 666 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 PRSS16Q9NQE7 514 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 CMC2Q9NRP2 79 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 HHLA2Q9UM44 414 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 GPR55Q9Y2T6 319 aaPredicted RBP11.78□□□□□ -0.52
VAMP4-201ENST00000236192 LRP5LA4QPB2 252 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 HIDE1A8MVS5 230 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 APOA2P02652 100 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 C21orf58P58505 322 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 LANCL3Q6ZV70 420 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 SMIM12Q96EX1 92 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 TCTN2Q96GX1 697 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 SIGLEC11Q96RL6 698 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 SFXN1Q9H9B4 322 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 RAB18Q9NP72 206 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 LATO43561 262 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 IL33O95760 270 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 TRGC2P03986 189 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 OMGP23515 440 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 PSMB3P49720 205 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 PNRC1Q12796 327 aaPredicted RBP11.78□□□□□ -0.52
VAMP4-201ENST00000236192 SLC35D3Q5M8T2 416 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 RPL7L1Q6DKI1 246 aaKnown RBP11.78□□□□□ -0.52
VAMP4-201ENST00000236192 IL26Q9NPH9 171 aa11.78□□□□□ -0.52
VAMP4-201ENST00000236192 FAM166BA8MTA8 275 aa11.77□□□□□ -0.52
VAMP4-201ENST00000236192 CRHP06850 196 aa11.77□□□□□ -0.52
VAMP4-201ENST00000236192 ACTR1BP42025 376 aa11.77□□□□□ -0.52
VAMP4-201ENST00000236192 PPP1R1AQ13522 171 aa11.77□□□□□ -0.52
VAMP4-201ENST00000236192 RAB11FIP5Q9BXF6 653 aa11.77□□□□□ -0.52
VAMP4-201ENST00000236192 RNF39Q9H2S5 420 aa11.77□□□□□ -0.52
VAMP4-201ENST00000236192 IGKV6D-21A0A0A0MT36 114 aa11.77□□□□□ -0.52
VAMP4-201ENST00000236192 NPIPA2E9PIF3 369 aa11.77□□□□□ -0.52
VAMP4-201ENST00000236192 RAD51DO75771 328 aa11.77□□□□□ -0.52
VAMP4-201ENST00000236192 LRG1P02750 347 aa11.77□□□□□ -0.52
VAMP4-201ENST00000236192 VSIG10L2P0DP72 767 aa11.77□□□□□ -0.52
VAMP4-201ENST00000236192 THBS4P35443 961 aa11.77□□□□□ -0.52
VAMP4-201ENST00000236192 PAX5Q02548 391 aa11.77□□□□□ -0.52
VAMP4-201ENST00000236192 ENDOGQ14249 297 aaKnown RBP11.77□□□□□ -0.52
VAMP4-201ENST00000236192 ARSJQ5FYB0 599 aaPredicted RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms