RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 TMEM17Q86X19 198 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 KCNRGQ8N5I3 272 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 LRRC75AQ8NAA5 344 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 OR52B4Q8NGK2 314 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 GPX8Q8TED1 209 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 PTCHD1Q96NR3 888 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 SLCO5A1Q9H2Y9 848 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 CCDC86Q9H6F5 360 aaKnown RBP18.53■□□□□ 0.56
SNX3-201ENST00000230085 FRRS1LQ9P0K9 344 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 ADAM18Q9Y3Q7 739 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 FXYD6-FXYD2A0A087WZ82 144 aa18.52■□□□□ 0.55
SNX3-201ENST00000230085 PHYHO14832 338 aa18.52■□□□□ 0.55
SNX3-201ENST00000230085 CTSVO60911 334 aa18.52■□□□□ 0.55
SNX3-201ENST00000230085 OR2F2O95006 317 aa18.52■□□□□ 0.55
SNX3-201ENST00000230085 PSG6Q00889 435 aa18.52■□□□□ 0.55
SNX3-201ENST00000230085 RASGEF1BQ0VAM2 473 aa18.52■□□□□ 0.55
SNX3-201ENST00000230085 OR2F1Q13607 317 aa18.52■□□□□ 0.55
SNX3-201ENST00000230085 KCNAB1Q14722 419 aa18.52■□□□□ 0.55
SNX3-201ENST00000230085 LIPNQ5VXI9 398 aa18.52■□□□□ 0.55
SNX3-201ENST00000230085 FAAP20Q6NZ36 180 aa18.52■□□□□ 0.55
SNX3-201ENST00000230085 LINC00518Q8N0U6 118 aa18.52■□□□□ 0.55
SNX3-201ENST00000230085 OR51L1Q8NGJ5 315 aa18.52■□□□□ 0.55
SNX3-201ENST00000230085 ST8SIA2Q92186 375 aa18.52■□□□□ 0.55
SNX3-201ENST00000230085 FXYD6Q9H0Q3 95 aa18.52■□□□□ 0.55
SNX3-201ENST00000230085 TSPAN10Q9H1Z9 355 aaPredicted RBP18.52■□□□□ 0.55
SNX3-201ENST00000230085 FAM60AQ9NP50 221 aa18.52■□□□□ 0.55
SNX3-201ENST00000230085 SRPX2O60687 465 aaPredicted RBP18.51■□□□□ 0.55
SNX3-201ENST00000230085 CT62P0C5K7 136 aa18.51■□□□□ 0.55
SNX3-201ENST00000230085 S1PR1P21453 382 aa18.51■□□□□ 0.55
SNX3-201ENST00000230085 COL9A2Q14055 689 aaPredicted RBP18.51■□□□□ 0.55
SNX3-201ENST00000230085 DCAF12L2Q5VW00 463 aa18.51■□□□□ 0.55
SNX3-201ENST00000230085 FIGLAQ6QHK4 219 aa18.51■□□□□ 0.55
SNX3-201ENST00000230085 CARFQ8N187 725 aa18.51■□□□□ 0.55
SNX3-201ENST00000230085 C19orf47Q8N9M1 422 aaKnown RBP18.51■□□□□ 0.55
SNX3-201ENST00000230085 TMEM229BQ8NBD8 167 aa18.51■□□□□ 0.55
SNX3-201ENST00000230085 SLC41A2Q96JW4 573 aa18.51■□□□□ 0.55
SNX3-201ENST00000230085 STRADBQ9C0K7 418 aa18.51■□□□□ 0.55
SNX3-201ENST00000230085 OCIAD1Q9NX40 245 aa18.51■□□□□ 0.55
SNX3-201ENST00000230085 SOHLH2Q9NX45 425 aa18.51■□□□□ 0.55
SNX3-201ENST00000230085 FBXL2Q9UKC9 423 aa18.51■□□□□ 0.55
SNX3-201ENST00000230085 TRAV14DV4A0A0A6YYC5 116 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 A0A0A6YYH2 397 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 A0A1W2PNU3 283 aaPredicted RBP18.5■□□□□ 0.55
SNX3-201ENST00000230085 PMS2P1A4D2B8 440 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 A6NJ64 397 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 GOSR2O14653 212 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 CDC40O60508 579 aaKnown RBP eCLIP18.5■□□□□ 0.55
SNX3-201ENST00000230085 ANXA2P07355 339 aaKnown RBP18.5■□□□□ 0.55
SNX3-201ENST00000230085 CD14P08571 375 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 SPINK2P20155 84 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 RPL4P36578 427 aaKnown RBP18.5■□□□□ 0.55
SNX3-201ENST00000230085 HSD11B2P80365 405 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 LY6G6FQ5SQ64 297 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 OR6K6Q8NGW6 343 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 ZCCHC10Q8TBK6 192 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 TNFAIP8L1Q8WVP5 186 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 ANKRD9Q96BM1 317 aaPredicted RBP18.5■□□□□ 0.55
SNX3-201ENST00000230085 LIN37Q96GY3 246 aaPredicted RBP18.5■□□□□ 0.55
SNX3-201ENST00000230085 CMKLR1Q99788 373 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 POTEKPQ9BYX7 375 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 SEMA4CQ9C0C4 833 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 MS4A7Q9GZW8 240 aaPredicted RBP18.5■□□□□ 0.55
SNX3-201ENST00000230085 PURGQ9UJV8 347 aaKnown RBP18.5■□□□□ 0.55
SNX3-201ENST00000230085 TMEM14AQ9Y6G1 99 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 SPTBP11277 2137 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 TCRBV16S1A1N1A0A5B0 115 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 IDSB3KWA1 339 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 DOK2O60496 412 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 RLN2P04090 185 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 CCL4P13236 92 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 MPZP25189 248 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 MST1P26927 711 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 ARL4DP49703 201 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 EXOSC7Q15024 291 aaKnown RBP18.5■□□□□ 0.55
SNX3-201ENST00000230085 ZNHIT3Q15649 155 aaPredicted RBP18.5■□□□□ 0.55
SNX3-201ENST00000230085 RNF44Q7L0R7 432 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 RAB11FIP2Q7L804 512 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 KMT5CQ86Y97 462 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 CCDC36Q8IYA8 594 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 AGBL5Q8NDL9 886 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 OR2G2Q8NGZ5 317 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 ZFYVE21Q9BQ24 234 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 COMMD4Q9H0A8 199 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 WASF3Q9UPY6 502 aa18.5■□□□□ 0.55
SNX3-201ENST00000230085 FREM2Q5SZK8 3169 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 RAB19A4D1S5 217 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 TEX46H3BTG2 121 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 LGALS8O00214 317 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 SLC17A2O00624 439 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 HCRTR1O43613 425 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 WNT11O96014 354 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 TMIGD3P0DMS9 266 aaPredicted RBP18.49■□□□□ 0.55
SNX3-201ENST00000230085 FOLR1P15328 257 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 SDHAP31040 664 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 PRSS3P35030 304 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 TAS2R19P59542 299 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 CA13Q8N1Q1 262 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 D2HGDHQ8N465 521 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 TMEM52Q8NDY8 209 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 ZPLD1Q8TCW7 415 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms