RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 OR52I2Q8NH67 350 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 PAQR8Q8TEZ7 354 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 S100A16Q96FQ6 103 aaKnown RBP17.07■□□□□ 0.32
YBX3-201ENST00000228251 DMRTB1Q96MA1 342 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 DPAGT1Q9H3H5 408 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 HDGFL3Q9Y3E1 203 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 NUBP2Q9Y5Y2 271 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 A0A1W2PNR3 127 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 RGS13O14921 159 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 TCRBP04435 133 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 CDK2P24941 298 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 NDUFAF7Q7L592 441 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 LINC00346Q8IVM7 164 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 SERPINA12Q8IW75 414 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 UEVLDQ8IX04 471 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 TSEN15Q8WW01 171 aaKnown RBP17.07■□□□□ 0.32
YBX3-201ENST00000228251 C11orf40Q8WZ69 217 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 GHITMQ9H3K2 345 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 TMEM185BQ9H7F4 350 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 PTGES2Q9H7Z7 377 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 CYB5R1Q9UHQ9 305 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 MED12Q93074 2177 aa17.06■□□□□ 0.32
YBX3-201ENST00000228251 H3BSH0 61 aa17.06■□□□□ 0.32
YBX3-201ENST00000228251 ITGA5P08648 1049 aa17.06■□□□□ 0.32
YBX3-201ENST00000228251 CCL3P10147 92 aa17.06■□□□□ 0.32
YBX3-201ENST00000228251 RAG2P55895 527 aa17.06■□□□□ 0.32
YBX3-201ENST00000228251 MLF1P58340 268 aa17.06■□□□□ 0.32
YBX3-201ENST00000228251 MRPS10P82664 201 aaKnown RBP17.06■□□□□ 0.32
YBX3-201ENST00000228251 HIST3H3Q16695 136 aa17.06■□□□□ 0.32
YBX3-201ENST00000228251 THEM4Q5T1C6 240 aa17.06■□□□□ 0.32
YBX3-201ENST00000228251 SLC22A10Q63ZE4 541 aa17.06■□□□□ 0.32
YBX3-201ENST00000228251 TMEM225Q6GV28 225 aa17.06■□□□□ 0.32
YBX3-201ENST00000228251 TCEAL6Q6IPX3 200 aa17.06■□□□□ 0.32
YBX3-201ENST00000228251 MTFR2Q6P444 385 aa17.06■□□□□ 0.32
YBX3-201ENST00000228251 LINGO2Q7L985 606 aa17.06■□□□□ 0.32
YBX3-201ENST00000228251 ZNF227Q86WZ6 799 aa17.06■□□□□ 0.32
YBX3-201ENST00000228251 NOXO1Q8NFA2 376 aa17.06■□□□□ 0.32
YBX3-201ENST00000228251 OR10S1Q8NGN2 331 aa17.06■□□□□ 0.32
YBX3-201ENST00000228251 GCDHQ92947 438 aaPredicted RBP17.06■□□□□ 0.32
YBX3-201ENST00000228251 TCEAL3Q969E4 200 aa17.06■□□□□ 0.32
YBX3-201ENST00000228251 SLC25A28Q96A46 364 aa17.06■□□□□ 0.32
YBX3-201ENST00000228251 OR5B2Q96R09 309 aa17.06■□□□□ 0.32
YBX3-201ENST00000228251 TRAF4Q9BUZ4 470 aaPredicted RBP17.06■□□□□ 0.32
YBX3-201ENST00000228251 TP63Q9H3D4 680 aaPredicted RBP17.06■□□□□ 0.32
YBX3-201ENST00000228251 COPZ2Q9P299 210 aa17.06■□□□□ 0.32
YBX3-201ENST00000228251 A0A0A6YYJ9 748 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 AQP7P3A6NL99 342 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 CENPXA8MT69 81 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 FAM47E-STBD1D6RA91 191 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 SLC17A2O00624 439 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 RAMP1O60894 148 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 GLSO94925 669 aaPredicted RBP17.05■□□□□ 0.32
YBX3-201ENST00000228251 OPN1LWP04000 364 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 TMIGD3P0DMS9 266 aaPredicted RBP17.05■□□□□ 0.32
YBX3-201ENST00000228251 KLK2P20151 261 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 ACHEP22303 614 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 TCEA1P23193 301 aaKnown RBP17.05■□□□□ 0.32
YBX3-201ENST00000228251 H3F3AP84243 136 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 CD83Q01151 205 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 BCL2A1Q16548 175 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 SLC25A47Q6Q0C1 308 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 BIVMQ86UB2 503 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 LYPD6Q86Y78 171 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 OR6X1Q8NH79 312 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 SLC25A44Q96H78 314 aaPredicted RBP17.05■□□□□ 0.32
YBX3-201ENST00000228251 FAM210AQ96ND0 272 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 OXGR1Q96P68 337 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 CACNG6Q9BXT2 260 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 BEX2Q9BXY8 128 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 NUDT15Q9NV35 164 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 EMC9Q9Y3B6 208 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 RAD1O60671 282 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 KRT33AO76009 404 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 GIFP27352 417 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 DCTDP32321 178 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 MMP16P51512 607 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 SSR4P51571 173 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 TAS2R20P59543 309 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 LPAL2Q16609 132 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 TMEM69Q5SWH9 247 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 PPP1R32Q7Z5V6 425 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 NOXA1Q86UR1 476 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 NECAB3Q96P71 396 aaPredicted RBP17.05■□□□□ 0.32
YBX3-201ENST00000228251 RBP7Q96R05 134 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 CDCP1Q9H5V8 836 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 RYDENQ9NUL5 291 aaKnown RBP17.05■□□□□ 0.32
YBX3-201ENST00000228251 DDX28Q9NUL7 540 aaKnown RBP17.05■□□□□ 0.32
YBX3-201ENST00000228251 MCUBQ9NWR8 336 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 OR52A1Q9UKL2 312 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 DHDHQ9UQ10 334 aa17.05■□□□□ 0.32
YBX3-201ENST00000228251 LIFP15018 202 aa17.04■□□□□ 0.32
YBX3-201ENST00000228251 LAP3P28838 519 aa17.04■□□□□ 0.32
YBX3-201ENST00000228251 FOLR3P41439 243 aa17.04■□□□□ 0.32
YBX3-201ENST00000228251 TMEM255AQ5JRV8 349 aa17.04■□□□□ 0.32
YBX3-201ENST00000228251 BCL2L15Q5TBC7 163 aa17.04■□□□□ 0.32
YBX3-201ENST00000228251 ANKRD16Q6P6B7 361 aa17.04■□□□□ 0.32
YBX3-201ENST00000228251 CORO6Q6QEF8 472 aa17.04■□□□□ 0.32
YBX3-201ENST00000228251 BTN2A1Q7KYR7 527 aa17.04■□□□□ 0.32
YBX3-201ENST00000228251 AKAP1Q92667 903 aaKnown RBP eCLIP17.04■□□□□ 0.32
YBX3-201ENST00000228251 ZNF160Q9HCG1 818 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms