RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 TMPRSS11FQ6ZWK6 438 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 ARPINQ7Z6K5 226 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.47□□□□□ -0.25
ERCC1-201ENST00000013807 AKR7LQ8NHP1 331 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 SLC25A40Q8TBP6 338 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 IPCEF1Q8WWN9 437 aaPredicted RBP13.47□□□□□ -0.25
ERCC1-201ENST00000013807 NSMAFQ92636 917 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 GTF3AQ92664 365 aaKnown RBP13.47□□□□□ -0.25
ERCC1-201ENST00000013807 RAB1CQ92928 201 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 FAHD2AQ96GK7 314 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 TIMD4Q96H15 378 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 TMPRSS13Q9BYE2 586 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 OR2J1Q9GZK6 312 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 OCEL1Q9H607 264 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 ELOVL3Q9HB03 270 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 FGFR1OP2Q9NVK5 253 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 TBCCD1Q9NVR7 557 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 SNX13Q9Y5W8 968 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 A0A0G2JMP0 313 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 A0A0X1KG70 313 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 PLSCR5A0PG75 271 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 HAX1O00165 279 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 NGFP01138 241 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 GUCA1AP43080 201 aaPredicted RBP13.46□□□□□ -0.25
ERCC1-201ENST00000013807 PPP1CBP62140 327 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 SLC3A1Q07837 685 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 TSTQ16762 297 aaKnown RBP13.46□□□□□ -0.25
ERCC1-201ENST00000013807 TUSC1Q2TAM9 212 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 AVPI1Q5T686 147 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 RFPL4BQ6ZWI9 263 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 OAFQ86UD1 273 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 NRMQ8IXM6 262 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 SLC15A3Q8IY34 581 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 CLDN22Q8N7P3 220 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 ICA1LQ8NDH6 482 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 OR4M2Q8NGB6 313 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 RP9Q8TA86 221 aaKnown RBP13.46□□□□□ -0.25
ERCC1-201ENST00000013807 ZNF418Q8TF45 676 aaPredicted RBP13.46□□□□□ -0.25
ERCC1-201ENST00000013807 FAM216AQ8WUB2 273 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 ACOT11Q8WXI4 607 aaPredicted RBP13.46□□□□□ -0.25
ERCC1-201ENST00000013807 TPD52L3Q96J77 140 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 C4orf45Q96LM5 186 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 EGLN1Q9GZT9 426 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 CCDC134Q9H6E4 229 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 POLE4Q9NR33 117 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 CMTM6Q9NX76 183 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 CACNG2Q9Y698 323 aa13.46□□□□□ -0.25
ERCC1-201ENST00000013807 A0A087WUU8 490 aa13.45□□□□□ -0.26
ERCC1-201ENST00000013807 ZSCAN5BA6NJL1 495 aa13.45□□□□□ -0.26
ERCC1-201ENST00000013807 C12orf71A8MTZ7 269 aa13.45□□□□□ -0.26
ERCC1-201ENST00000013807 IFNW1P05000 195 aa13.45□□□□□ -0.26
ERCC1-201ENST00000013807 MSR1P21757 451 aa13.45□□□□□ -0.26
ERCC1-201ENST00000013807 CDK5R2Q13319 367 aa13.45□□□□□ -0.26
ERCC1-201ENST00000013807 ZMAT1Q5H9K5 638 aa13.45□□□□□ -0.26
ERCC1-201ENST00000013807 C8orf82Q6P1X6 216 aaPredicted RBP13.45□□□□□ -0.26
ERCC1-201ENST00000013807 SHQ1Q6PI26 577 aaKnown RBP13.45□□□□□ -0.26
ERCC1-201ENST00000013807 ARL9Q6T311 187 aa13.45□□□□□ -0.26
ERCC1-201ENST00000013807 CBLL1Q75N03 491 aa13.45□□□□□ -0.26
ERCC1-201ENST00000013807 FAM122BQ7Z309 247 aa13.45□□□□□ -0.26
ERCC1-201ENST00000013807 C1QL2Q7Z5L3 287 aa13.45□□□□□ -0.26
ERCC1-201ENST00000013807 VTCN1Q7Z7D3 282 aa13.45□□□□□ -0.26
ERCC1-201ENST00000013807 ZER1Q7Z7L7 766 aa13.45□□□□□ -0.26
ERCC1-201ENST00000013807 OR51A7Q8NH64 312 aa13.45□□□□□ -0.26
ERCC1-201ENST00000013807 FNDC11Q9BVV2 318 aa13.45□□□□□ -0.26
ERCC1-201ENST00000013807 ANKRD19PQ9H560 264 aa13.45□□□□□ -0.26
ERCC1-201ENST00000013807 NDRG4Q9ULP0 352 aaKnown RBP13.45□□□□□ -0.26
ERCC1-201ENST00000013807 PCDHB10Q9UN67 800 aa13.45□□□□□ -0.26
ERCC1-201ENST00000013807 POLR3KQ9Y2Y1 108 aaPredicted RBP13.45□□□□□ -0.26
ERCC1-201ENST00000013807 CAPN7Q9Y6W3 813 aa13.45□□□□□ -0.26
ERCC1-201ENST00000013807 TRAV27A0A087WT01 109 aa13.44□□□□□ -0.26
ERCC1-201ENST00000013807 TMEM89A2RUT3 159 aa13.44□□□□□ -0.26
ERCC1-201ENST00000013807 EFCAB9A8MZ26 197 aa13.44□□□□□ -0.26
ERCC1-201ENST00000013807 TPD52L2O43399 206 aaKnown RBP13.44□□□□□ -0.26
ERCC1-201ENST00000013807 SPRY3O43610 288 aa13.44□□□□□ -0.26
ERCC1-201ENST00000013807 FSHBP01225 129 aa13.44□□□□□ -0.26
ERCC1-201ENST00000013807 SCG5P05408 212 aa13.44□□□□□ -0.26
ERCC1-201ENST00000013807 CD14P08571 375 aa13.44□□□□□ -0.26
ERCC1-201ENST00000013807 EPHA1P21709 976 aa13.44□□□□□ -0.26
ERCC1-201ENST00000013807 ARHGDIAP52565 204 aa13.44□□□□□ -0.26
ERCC1-201ENST00000013807 GLO1Q04760 184 aa13.44□□□□□ -0.26
ERCC1-201ENST00000013807 PSG7Q13046 419 aa13.44□□□□□ -0.26
ERCC1-201ENST00000013807 TOP3AQ13472 1001 aaPredicted RBP13.44□□□□□ -0.26
ERCC1-201ENST00000013807 SPATA46Q5T0L3 261 aa13.44□□□□□ -0.26
ERCC1-201ENST00000013807 ZNF774Q6NX45 483 aa13.44□□□□□ -0.26
ERCC1-201ENST00000013807 MBOAT2Q6ZWT7 520 aa13.44□□□□□ -0.26
ERCC1-201ENST00000013807 ABHD4Q8TB40 342 aa13.44□□□□□ -0.26
ERCC1-201ENST00000013807 GEMIN6Q8WXD5 167 aaKnown RBP13.44□□□□□ -0.26
ERCC1-201ENST00000013807 CCL17Q92583 94 aa13.44□□□□□ -0.26
ERCC1-201ENST00000013807 HOPXQ9BPY8 73 aaPredicted RBP13.44□□□□□ -0.26
ERCC1-201ENST00000013807 MGAM2Q2M2H8 2515 aa13.43□□□□□ -0.26
ERCC1-201ENST00000013807 PKD1L1Q8TDX9 2849 aa13.43□□□□□ -0.26
ERCC1-201ENST00000013807 LOC105371242A0A075B767 164 aa13.43□□□□□ -0.26
ERCC1-201ENST00000013807 J3KTA2 159 aa13.43□□□□□ -0.26
ERCC1-201ENST00000013807 CDC42EP2O14613 210 aa13.43□□□□□ -0.26
ERCC1-201ENST00000013807 ZNF26P17031 533 aaPredicted RBP13.43□□□□□ -0.26
ERCC1-201ENST00000013807 KITLGP21583 273 aa13.43□□□□□ -0.26
ERCC1-201ENST00000013807 CFPP27918 469 aa13.43□□□□□ -0.26
ERCC1-201ENST00000013807 ZBED5Q49AG3 693 aa13.43□□□□□ -0.26
ERCC1-201ENST00000013807 MTX3Q5HYI7 312 aa13.43□□□□□ -0.26
ERCC1-201ENST00000013807 TSEN54Q7Z6J9 526 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms