RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Gm20683H3BKJ1 410 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Gm21863J3KMP8 111 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Klk1b16P04071 261 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Hexim2Q3TVI4 313 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Trim46Q7TNM2 759 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Fam234bQ8BYI8 624 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Fbxw14Q8C2Y5 466 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Nxph3Q91VX5 252 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Yif1bQ9CX30 311 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Olfr971Q9EQ96 307 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Zfp995E9Q6M3 437 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Gfra2O08842 464 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Ifna5P07349 189 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Hnrnpa1P49312 320 aaKnown RBP12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Rac2Q05144 192 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Tle1Q62440 770 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Olfr774Q7TRI5 312 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Rnf222Q8CEF8 211 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Dmbx1Q91ZK4 381 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Cyb5bQ9CQX2 146 aaKnown RBP12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Vmn1r65Q9EPS7 332 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Ch25hQ9Z0F5 298 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 AfdnQ9QZQ1 1820 aaKnown RBP12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Kat6aQ8BZ21 2003 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Igkv18-36A0A075B5M9 114 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Lcn11A2BHR2 178 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 SvaE9PX96 165 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 SnrpgP62309 76 aaKnown RBP12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Rab3cP62823 227 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Doc2bP70169 412 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Arntl2Q2VPD4 579 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Fpr-rs7Q71MR7 338 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Olfr598Q7TRR2 319 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Ska3Q8C263 411 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Odf4Q8VI88 290 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 NanpQ9CPT3 248 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Q9CQT6 229 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Olfr159Q9QZ19 319 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Syt9Q9R0N9 491 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 ArntlQ9WTL8 632 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Trav6-7-dv9A0A075B639 125 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 2610044O15Rik8A0A087WRJ1 410 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Sirpb1bA0A0A6YXN8 397 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Sirpb1cK7N6K7 397 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Olfr209L7N1X3 305 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Sox18P43680 377 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Isl1P61372 349 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Pcbd1P61458 104 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Adam9Q61072 845 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 HpQ61646 347 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Amer3Q6NS69 780 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Olfr506Q7TRU6 314 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Csnk1g1Q8BTH8 459 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Galnt6Q8C7U7 622 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Olfr1389Q8VGX0 311 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Plekhf2Q91WB4 249 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Mcts1Q9DB27 181 aa12.94□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Gm3952A0A0A6YXJ1 191 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 C2cd6E9Q152 557 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 AcheP21836 614 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Epha4Q03137 986 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Tmem38aQ3TMP8 298 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Q8C4X7 151 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Srpx2Q8R054 468 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Olfr131Q8VGC8 314 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Olfr870Q8VGG4 311 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 LipfQ9CPP7 395 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Tmem8aQ9ESN3 769 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Adam21Q9JI76 729 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Gm43951A0A0N4SUT6 962 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Rpl7a-ps5A0A140T8L3 268 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 DytnA2CI98 653 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 PtgdsO09114 189 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 GalP47212 124 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 PdxpP60487 292 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Foxj1Q61660 421 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Clvs2Q8BG92 327 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Calhm2Q8VEC4 323 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Olfr1412Q8VET3 321 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Q9D1K7 174 aaKnown RBP12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Scamp4Q9JKV5 230 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Gm42420A0A0J9YUQ2 99 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Hsbp1l1B2RXB2 72 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Vmn1r88E9Q235 316 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Olfr555E9Q547 315 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Hoxd4P10628 250 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Elk1P41969 429 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Gm9999Q8C5Y2 53 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Mmp28Q8CGV8 520 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 AspaQ8R3P0 312 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Keg1Q9DCY0 295 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Rad1Q9QWZ1 280 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 PrkraQ9WTX2 313 aaKnown RBP12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Olfr64F8VPZ8 307 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Sstr5O08858 362 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 GypaP14220 168 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Txn2P97493 166 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Garem1Q3UFT3 876 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Olig3Q6PFG8 273 aa12.93□□□□□ -0.34
Col3a1-201ENSMUST00000087883 Pi15Q8BS03 258 aa12.93□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms