RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Nxph1Q61200 271 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Cadm2Q8BLQ9 435 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Aph1aQ8BVF7 265 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Pgam5Q8BX10 288 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Ak6Q8VCP8 172 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Olfr862Q8VFJ1 306 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Olfr341Q8VGK9 313 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 B3gat1Q9CW73 334 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Tmed11Q9D2R4 215 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Rabl3Q9D4V7 236 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Hspb11Q9D6H2 143 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Iqcf5Q9DAL7 148 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 DcpsQ9DAR7 338 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 TrmuQ9DAT5 417 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Alyref2Q9JJW6 218 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Ndrg3Q9QYF9 375 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Gm3839S4R1W1 333 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Scn3aA2ASI5 1947 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Rbm8a2A0A0N4SUH6 174 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Vmn1r67G5E8C1 305 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Vmn2r99H3BK37 856 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Bloc1s1O55102 125 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Gsx1P31315 261 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 FblP35550 327 aaKnown RBP8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Syt4P40749 425 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 St6galnac2P70277 373 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Vamp7P70280 220 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Foxr2Q3UM89 302 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Gm10750Q3V0I0 133 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Fam220aQ3ZN08 260 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Ppp1r13lQ5I1X5 824 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 SpicQ6P3D7 242 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Sys1Q78S06 156 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 IfneQ80ZF2 192 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Clic5Q8BXK9 251 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 LaynQ8C351 381 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Q8C3W1 322 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Ugt2b34Q8K154 532 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Olfr1226Q8VGM5 310 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 AadacQ99PG0 398 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Chmp1b2Q9CQD4 199 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Rbm8aQ9CWZ3 174 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Ankrd7Q9D504 279 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Gpx8Q9D7B7 209 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Echdc3Q9D7J9 300 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Fgf16Q9ESL8 207 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Copz2Q9JHH9 205 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 GraspQ9JJA9 392 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Cyp2d22Q9JKY7 500 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Clec4dQ9Z2H6 219 aa8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Knop1Q9Z2Q2 478 aaKnown RBP8.15□□□□□ -1.1
Upf3b-201ENSMUST00000076265 Aox1O54754 1333 aa8.15□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr1158A2BHP7 313 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr110A2RT31 317 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Trabd2bB1ATG9 517 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Mkrn2osD3Z393 217 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 TectbO08524 329 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Ca11O70354 328 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 P01666 111 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 AlplP09242 524 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Pax6P63015 422 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Tff2Q03404 129 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Znf112Q0VAW7 879 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Kctd16Q5DTY9 427 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Q5XFZ0 217 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Sp9Q64HY3 484 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Fpr-rs7Q71MR7 338 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr111Q7TRK1 317 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Cldn34b3Q80ZS5 209 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Slc35f1Q8BGK5 408 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Lrrc4cQ8C031 640 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Dedd2Q8QZV0 330 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Cd177Q8R2S8 817 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 RpeQ8VEE0 228 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr1176Q8VG40 315 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr676Q8VGZ9 317 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Mrgpra8Q91ZC4 305 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Mrpl43Q99N89 183 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Ufc1Q9CR09 167 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Phf19Q9CXG9 578 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Necap2Q9D1J1 266 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Plekhj1Q9D240 164 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Snrnp48Q9D361 337 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Gng12Q9DAS9 72 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Ube2j1Q9JJZ4 318 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Fkbp1bQ9Z2I2 108 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Prr36E9PV26 1098 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Esp36G3UZD8 160 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Cd160O88875 185 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Il3P01586 166 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Hoxb5P09079 269 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Fitm2P59266 262 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Bop1P97452 732 aaKnown RBP8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Gm14226Q3TZL0 686 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 B3gntl1Q3U129 357 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Myl10Q62082 202 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Ces3aQ63880 571 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Prss54Q7M756 383 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Slc37a1Q8R070 531 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Ces3bQ8VCU1 571 aa8.14□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms