RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 ptchd1Q14B62 888 aa13.51□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 CishQ62225 257 aa13.51□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 D11Wsu47eQ6PIX9 558 aa13.51□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Cbln2Q8BGU2 224 aa13.51□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Slc16a13Q8CE94 428 aa13.51□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Tmed4Q8R1V4 227 aa13.51□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Lrrc3bQ8VCH9 259 aa13.51□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Mrm1Q99J25 320 aa13.51□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Alkbh7Q9D6Z0 221 aa13.51□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Lime1Q9EQR5 269 aa13.51□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 GraspQ9JJA9 392 aa13.51□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Plp2Q9R1Q7 152 aa13.51□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Olfr1214A2ATG3 311 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 H1f0P10922 194 aaKnown RBP13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Clec10aP49300 304 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 RoraP51448 523 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Nrg2P56974 756 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 SgcgP82348 291 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Tnfrsf26P83626 204 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Fam109bQ14B98 259 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Doc2aQ7TNF0 405 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Olfr1349Q7TQV1 317 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Crls1Q80ZM8 303 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Nob1Q8BW10 403 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 RfesdQ8K2P6 157 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Olfr1079Q8VF52 315 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Olfr1163Q8VFR4 316 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Mrgpra5Q91ZC7 304 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Asb12Q9D738 308 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Upf1Q9EPU0 1124 aaKnown RBP13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Kcnmb4Q9JIN6 210 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Aqp9Q9JJJ3 295 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 HnrnpdlQ9Z130 301 aaKnown RBP13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Ptdss2Q9Z1X2 473 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Gm13102A2ASJ3 519 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Gm5901D3YVJ1 333 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 AipO08915 330 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Psmb1O09061 240 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Dsg2O55111 1122 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Tnfaip1O70479 316 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Meox2P32443 303 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Tmem14aP56983 99 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Nup43P59235 380 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Taf13P61216 124 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Cass4Q08EC4 804 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 KcnrgQ2TUM3 264 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Milr1Q3TB92 246 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Fbxo31Q3TQF0 507 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Lin28bQ45KJ6 247 aaKnown RBP13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Frg2f1Q6P3A2 227 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Olfr775Q7TRI4 312 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Dtx3Q80V91 347 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Ap5m1Q8BJ63 490 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Gramd1cQ8CI52 457 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Vmn1r210Q8R274 306 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Olfr644Q8VH21 314 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Snx18Q91ZR2 614 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Olfr459Q924H8 314 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Rbm18Q9CR83 190 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Mrpl28Q9D1B9 257 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Raet1dQ9JI58 249 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Klhl1Q9JI74 751 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 LipgQ9WVG5 500 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Mocs2Q9Z223 189 aa13.5□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Olfr1432A0A140LHS7 346 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Aadacl3A2A7Z8 408 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Gm11758A2BEI6 360 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Gm11757A2BEI8 360 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Scgb1b30A2BH64 92 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Gm21970F6XX07 295 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Olfr936J3KMV2 267 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Gm3685J3QPP2 205 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Psmd4O35226 376 aaKnown RBP13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Wnt2bO70283 389 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Il6P08505 211 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 GipP48756 144 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Ddx6P54823 483 aaKnown RBP13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Gpr160Q3U3F9 336 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Smad2Q62432 467 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Spon2Q8BMS2 330 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Spata33Q8C624 132 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Fam221aQ8C790 301 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Vmn1r42Q8VBS7 329 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Dhcr24Q8VCH6 516 aaKnown RBP13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Olfr883Q8VF64 309 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Olfr800Q8VFH7 311 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Olfr672Q8VG28 312 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Olfr1389Q8VGX0 311 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Ceacam20Q9D2Z1 577 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Cmpk1Q9DBP5 196 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 RhagQ9QUT0 438 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 TsnaxQ9QZE7 290 aaKnown RBP13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Atxn7l3A2AWT3 347 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 SrsxB2RZI1 361 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Vmn1r177E9PXM3 309 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Vmn1r68E9Q0V3 319 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Stc2O88452 296 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 PrnpP04925 254 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Foxa3P35584 353 aa13.49□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Hnrnpa1P49312 320 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 93.7 ms