RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Btn1a1Q62556 524 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Cfap161Q6P8Y0 303 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr774Q7TRI5 312 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Ikzf5Q8BU00 419 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Vmn1r217Q8R270 298 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Zdhhc5Q8VDZ4 715 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Sema7aQ9QUR8 664 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 NesQ6P5H2 1864 aaKnown RBP9.4□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr1124A2AT86 318 aa9.4□□□□□ -0.91
Ubr1-201ENSMUST00000028728 EmdO08579 259 aaKnown RBP9.4□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Tspan6O70401 245 aa9.4□□□□□ -0.91
Ubr1-201ENSMUST00000028728 P04213 122 aa9.4□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Zfp26P10076 861 aa9.4□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr733Q14AK5 308 aa9.4□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Bbs12Q5SUD9 708 aa9.4□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Rbmxl1Q91VM5 388 aaKnown RBP9.4□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Mrm1Q99J25 320 aa9.4□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Pex13Q9D0K1 405 aa9.4□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Vmn1r172Q9EPS4 313 aa9.4□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Nme7Q9QXL8 395 aa9.4□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Gk2Q9WU65 554 aa9.4□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Gm10718D3Z1I7 227 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Rnf165E9QAU8 347 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Slc6a18O88576 615 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 P01673 111 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Nid1P10493 1245 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 SstP60041 116 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 HbegfQ06186 208 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 SpicQ6P3D7 242 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Fam3cQ91VU0 227 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Rpe65Q91ZQ5 533 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Clstn3Q99JH7 956 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr155Q9QZ22 319 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Gm20431E9PY39 371 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Vmn2r16E9Q025 850 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Slc38a6G3UVW3 457 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Grk6O70293 576 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 H3f3cP02301 136 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 H3f3aP84244 136 aaKnown RBP9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Arntl2Q2VPD4 579 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Tmem30aQ8VEK0 364 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Rwdd3Q8VIL2 267 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Ms4a4cQ9D3F6 226 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Dmac2Q9D7K5 258 aaKnown RBP9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 1700086D15RikQ9D9E9 151 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Lgi1Q9JIA1 557 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Zfp964B2RR88 472 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 SvaE9PX96 165 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Fbxw28E9Q8A4 466 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Zfp934K7N6H3 473 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 PtgdsO09114 189 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 IghmP01872 454 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Itgb2P11835 771 aaKnown RBP9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 CdaP56389 146 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Gabrr1P56475 480 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Tpt1P63028 172 aaKnown RBP9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Vdac3Q60931 283 aaKnown RBP9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Pptc7Q6NVE9 310 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr1216Q7TR05 311 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Mrgpra8Q91ZC4 305 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Lman2Q9DBH5 358 aaKnown RBP9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Sned1Q70E20 1403 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Cfap77A0A087WRI3 283 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Msx1P13297 303 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Zfp872Q3UVL3 465 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Cxcl17Q5UW37 119 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Fzd7Q61090 572 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr835Q7TRG7 311 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Tmem41bQ8K1A5 291 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Vmn1r37Q8R2E4 302 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Wdr74Q8VCG3 384 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Smim14Q91VT8 99 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Flvcr2Q91X85 551 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr159Q9QZ19 319 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Syt7Q9R0N7 403 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Scgb1b10A0A087WPW0 93 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 PvrigA0A1B0GS01 234 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Pate3B3GLJ3 98 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Bpifa1P97361 278 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Enpp3Q6DYE8 874 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 ManealQ6P1J0 452 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 ApoolQ78IK4 265 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr859Q7TRF5 309 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Rab13Q9DD03 202 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Timp4Q9JHB3 224 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Fut2Q9JL27 347 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Hnf4gQ9WUU6 408 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Fbxw15L7N1X6 466 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 LcatP16301 438 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Smpd1Q04519 627 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Ces2fQ08ED5 561 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Cramp1Q6PG95 1285 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr487Q7TRU9 314 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Paqr7Q80ZE4 345 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Gprin3Q8BWS5 763 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Hcar1Q8C131 343 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr702Q920Z2 318 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Polr2hQ923G2 150 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 MpiQ924M7 423 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Cotl1Q9CQI6 142 aa9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 43.4 ms