RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 LIMS3P0CW19 117 aa17.48■□□□□ 0.39
PHGDH-210ENST00000641115 LIMS4P0CW20 117 aa17.48■□□□□ 0.39
PHGDH-210ENST00000641115 MSR1P21757 451 aa17.48■□□□□ 0.39
PHGDH-210ENST00000641115 HCCSP53701 268 aa17.48■□□□□ 0.39
PHGDH-210ENST00000641115 MRPS34P82930 218 aaKnown RBP17.48■□□□□ 0.39
PHGDH-210ENST00000641115 GALEQ14376 348 aa17.48■□□□□ 0.39
PHGDH-210ENST00000641115 STK11Q15831 433 aa17.48■□□□□ 0.39
PHGDH-210ENST00000641115 FBXW9Q5XUX1 488 aa17.48■□□□□ 0.39
PHGDH-210ENST00000641115 LINGO2Q7L985 606 aa17.48■□□□□ 0.39
PHGDH-210ENST00000641115 CDC20BQ86Y33 519 aa17.48■□□□□ 0.39
PHGDH-210ENST00000641115 KLHL36Q8N4N3 616 aa17.48■□□□□ 0.39
PHGDH-210ENST00000641115 RORBQ92753 470 aa17.48■□□□□ 0.39
PHGDH-210ENST00000641115 ZNF837Q96EG3 531 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-210ENST00000641115 MRPL48Q96GC5 212 aaKnown RBP17.48■□□□□ 0.39
PHGDH-210ENST00000641115 ALG8Q9BVK2 526 aa17.48■□□□□ 0.39
PHGDH-210ENST00000641115 MALT1Q9UDY8 824 aa17.48■□□□□ 0.39
PHGDH-210ENST00000641115 PRSS50Q9UI38 385 aa17.48■□□□□ 0.39
PHGDH-210ENST00000641115 KCNG2Q9UJ96 466 aa17.48■□□□□ 0.39
PHGDH-210ENST00000641115 RPL36A-HNRNPH2H7BZ11 118 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 PHYHO14832 338 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 PTHP01270 115 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 TFAP2AP05549 437 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 GLI4P10075 376 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 NPR2P20594 1047 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 RPS27P42677 84 aaKnown RBP17.47■□□□□ 0.39
PHGDH-210ENST00000641115 RPL5P46777 297 aaKnown RBP17.47■□□□□ 0.39
PHGDH-210ENST00000641115 ACTA2P62736 377 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 ACTG2P63267 376 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 FAPQ12884 760 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 FOXF2Q12947 444 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 MED22Q15528 200 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 KCNMB1Q16558 191 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 SGCAQ16586 387 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 TEX30Q5JUR7 227 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 OTPQ5XKR4 325 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 XAF1Q6GPH4 301 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 TFAP2EQ6VUC0 442 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 TMPRSS11AQ6ZMR5 421 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 NANOGP1Q8N7R0 232 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 OTOSQ8NHW6 89 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 FOXB1Q99853 325 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 COPS3Q9UNS2 423 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 SHANK1Q9Y566 2161 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 ZNF99A8MXY4 864 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-210ENST00000641115 ZNF85Q03923 595 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 VWA1Q6PCB0 445 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 ZNF454Q8N9F8 522 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 OR52N1Q8NH53 320 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 EMC7Q9NPA0 242 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 TMEM38BQ9NVV0 291 aa17.47■□□□□ 0.39
PHGDH-210ENST00000641115 USP24Q9UPU5 2620 aa17.46■□□□□ 0.39
PHGDH-210ENST00000641115 FREM1Q5H8C1 2179 aa17.46■□□□□ 0.39
PHGDH-210ENST00000641115 TNFSF13O75888 250 aa17.46■□□□□ 0.39
PHGDH-210ENST00000641115 CNOT4O95628 575 aaKnown RBP17.46■□□□□ 0.39
PHGDH-210ENST00000641115 LCKP06239 509 aa17.46■□□□□ 0.39
PHGDH-210ENST00000641115 CEACAM8P31997 349 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-210ENST00000641115 WNT4P56705 351 aa17.46■□□□□ 0.39
PHGDH-210ENST00000641115 LSM6P62312 80 aaKnown RBP17.46■□□□□ 0.39
PHGDH-210ENST00000641115 PCK2Q16822 640 aa17.46■□□□□ 0.39
PHGDH-210ENST00000641115 OR2G6Q5TZ20 316 aa17.46■□□□□ 0.39
PHGDH-210ENST00000641115 UBE2UQ5VVX9 321 aa17.46■□□□□ 0.39
PHGDH-210ENST00000641115 SLC18B1Q6NT16 456 aa17.46■□□□□ 0.39
PHGDH-210ENST00000641115 ZNF367Q7RTV3 350 aa17.46■□□□□ 0.39
PHGDH-210ENST00000641115 RFLNBQ8N5W9 214 aa17.46■□□□□ 0.39
PHGDH-210ENST00000641115 THEM6Q8WUY1 208 aa17.46■□□□□ 0.39
PHGDH-210ENST00000641115 SNX33Q8WV41 574 aa17.46■□□□□ 0.39
PHGDH-210ENST00000641115 HTRA1Q92743 480 aa17.46■□□□□ 0.39
PHGDH-210ENST00000641115 NABP1Q96AH0 204 aa17.46■□□□□ 0.39
PHGDH-210ENST00000641115 ZNF649Q9BS31 505 aa17.46■□□□□ 0.39
PHGDH-210ENST00000641115 SFXN3Q9BWM7 321 aa17.46■□□□□ 0.39
PHGDH-210ENST00000641115 TTTY10Q9BZA0 68 aa17.46■□□□□ 0.39
PHGDH-210ENST00000641115 PROCRQ9UNN8 238 aa17.46■□□□□ 0.39
PHGDH-210ENST00000641115 CAB39Q9Y376 341 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-210ENST00000641115 TRGV8A0A0C4DH27 118 aa17.45■□□□□ 0.38
PHGDH-210ENST00000641115 SCG5P05408 212 aa17.45■□□□□ 0.38
PHGDH-210ENST00000641115 PSKH1P11801 424 aa17.45■□□□□ 0.38
PHGDH-210ENST00000641115 B4GALT1P15291 398 aa17.45■□□□□ 0.38
PHGDH-210ENST00000641115 JUNBP17275 347 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-210ENST00000641115 ALOX5APP20292 161 aa17.45■□□□□ 0.38
PHGDH-210ENST00000641115 PMPCAQ10713 525 aa17.45■□□□□ 0.38
PHGDH-210ENST00000641115 EIF2B1Q14232 305 aaKnown RBP17.45■□□□□ 0.38
PHGDH-210ENST00000641115 SPHARQ15513 63 aa17.45■□□□□ 0.38
PHGDH-210ENST00000641115 NRN1LQ496H8 165 aa17.45■□□□□ 0.38
PHGDH-210ENST00000641115 SSX6Q7RTT6 188 aa17.45■□□□□ 0.38
PHGDH-210ENST00000641115 ATCAYQ86WG3 371 aa17.45■□□□□ 0.38
PHGDH-210ENST00000641115 NAXEQ8NCW5 288 aa17.45■□□□□ 0.38
PHGDH-210ENST00000641115 OR2AJ1Q8NGZ0 328 aa17.45■□□□□ 0.38
PHGDH-210ENST00000641115 ASB17Q8WXJ9 295 aa17.45■□□□□ 0.38
PHGDH-210ENST00000641115 MUL1Q969V5 352 aa17.45■□□□□ 0.38
PHGDH-210ENST00000641115 SIAEQ9HAT2 523 aa17.45■□□□□ 0.38
PHGDH-210ENST00000641115 PLSCR4Q9NRQ2 329 aa17.45■□□□□ 0.38
PHGDH-210ENST00000641115 ATRXP46100 2492 aa17.45■□□□□ 0.38
PHGDH-210ENST00000641115 SEC14L2O76054 403 aa17.44■□□□□ 0.38
PHGDH-210ENST00000641115 FARS2O95363 451 aaKnown RBP17.44■□□□□ 0.38
PHGDH-210ENST00000641115 CTSSP25774 331 aa17.44■□□□□ 0.38
PHGDH-210ENST00000641115 PSMB9P28065 219 aa17.44■□□□□ 0.38
PHGDH-210ENST00000641115 MPGP29372 298 aa17.44■□□□□ 0.38
PHGDH-210ENST00000641115 SH3BGRP55822 239 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-210ENST00000641115 FAM27BQ5VT28 67 aa17.44■□□□□ 0.38
PHGDH-210ENST00000641115 ZNF322Q6U7Q0 402 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms